Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq23883 91.5 1e-13 >seq23883 Length=1467417 Score = 91.5 bits (100), Expect = 1e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 114336 TGTATTGCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAACCAA 114393 |||||| |||||||||| |||| |||||||||||||| |||| |||| ||||||||| Sbjct 2439 TGTATTTCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGCGATCAAAGGAACCAT 2498 Query 114394 AACTGATATATTGAGCCATTCG 114415 ||||||| || ||||||||||| Sbjct 2499 AACTGATTTAATGAGCCATTCG 2520 Score = 91.5 bits (100), Expect = 1e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 115533 TGTATTGCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAACCAA 115590 |||||| |||||||||| |||| |||||||||||||| |||| |||| ||||||||| Sbjct 2439 TGTATTTCTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAGCGATCAAAGGAACCAT 2498 Query 115591 AACTGATATATTGAGCCATTCG 115612 ||||||| || ||||||||||| Sbjct 2499 AACTGATTTAATGAGCCATTCG 2520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396936290500120