Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq18889 116 4e-21 seq20084 91.5 2e-13 seq22773 86.0 7e-12 >seq18889 Length=1054283 Score = 116 bits (128), Expect = 4e-21 Identities = 579/911 (64%), Gaps = 21/911 (2%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | || | | |||||||||| || | ||||| || |||||| Sbjct 964089 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAG 964148 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 ||||||||||| || |||| | |||||||| | | ||| | || ||| ||| Sbjct 964149 GCTGTGGGCATAGGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCC 964208 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTGG 114118 || || | |||||| || |||| || | ||| |||||| || | || Sbjct 964209 TTAAGCAGCTTCCAGTCCCAG---AGCTCAGTGGGCACCTTTTCCCACATGTCGTATTGC 964265 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 || || || |||| || || ||||||| || || || || || ||| Sbjct 964266 AGAATGCCCCTACTCACTGGGGAGCCTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCC 964325 Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238 || ||| |||| ||||| ||||| || | || || || ||||| || | ||||| Sbjct 964326 AACTCGCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAGC 964385 Query 114239 GCCTTGGCCTCGTCGGAA---TCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAG 114294 || ||| || ||| ||||| | || ||| | || || |||| || || Sbjct 964386 AGCTGGGCTTCA---GAACTTTCAAATG-GATAACGCATGAGGATGAAGGCATCTGCAAG 964441 Query 114295 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 114354 ||| || ||||||| |||||||| | || | | | || || || || || Sbjct 964442 ACCCTGCACACCGATCCCAATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAAC 964501 Query 114355 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 114414 || || | || | || || | | |||| |||||| | | || || |||| | Sbjct 964502 TGGGTAGTAGTTAATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTGA 964561 Query 114415 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 114474 |||||||| | ||||||| |||| ||| | | |||||| | || || || Sbjct 964562 GGCAAGCTTTTTGAAATCAAAGGTGCGT---TCTGGAGTAACATACATGTTGAGAGCAAT 964618 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 ||| |||| ||||| || | ||||| || || ||||| | ||| || || || Sbjct 964619 TGAGGCCAAGTTACAGACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCA 964678 Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 ||| || | || ||||||||||| |||| || || ||| ||||||| ||||| Sbjct 964679 CAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATC 964738 Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 114654 ||||| | |||||| || || ||||| || || || |||| | || || | ||| || Sbjct 964739 TTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATACCACAC 964798 Query 114655 AT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 114713 | | | | || | || || || ||| ||||||| || || |||||| || Sbjct 964799 CTGCTGAGCCTTGACCACCCGC-TTCACTCTACCCTCCTGTTCATATCGTGTGTACAGCT 964857 Query 114714 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGA 114772 |||||||| || ||| ||| | ||| || || | ||||| || | | | Sbjct 964858 TCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGG-GCACTCACTGGGACACATCAAA 964916 Query 114773 GACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAG 114832 ||||| | | || || | ||||||||| ||||| |||||||| || || || Sbjct 964917 GACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAG 964976 Query 114833 AAGAGATCCCG 114843 ||||| || || Sbjct 964977 AAGAGGTCTCG 964987 >seq20084 Length=15297 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| ||| ||| ||||| || ||||| |||||| ||||| || || || |||| Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| ||||||||| || || || || ||||||||||| ||||||||| || || | Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 12821 CCACCACACGCTC 12833 >seq22773 Length=730387 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || || ||| | ||||| | ||||| | |||||||||| || | ||| ||||| || ||| Sbjct 299251 TAAATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCGAGGATCTGGGCAGTAGAG 299310 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 ||||||||||| || |||| ||| |||||||| Sbjct 299311 GCTGTGGGCATTGGGGCCAGGAGGAGGCTGTT 299342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597159012064800