Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq10742 125 8e-24
seq1134 98.7 1e-15
seq18200 93.3 5e-14
seq666 93.3 5e-14
seq15175 91.5 2e-13
seq5960 91.5 2e-13
seq16312 89.7 6e-13
seq15988 89.7 6e-13
seq13196 89.7 6e-13
seq24754 86.0 7e-12
seq22663 86.0 7e-12
seq14478 86.0 7e-12
seq4874 84.2 2e-11
seq18712 82.4 8e-11
>seq10742
Length=3397572
Score = 125 bits (138), Expect = 8e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| || |||| |||||| || | ||| ||||||||||| ||||| || |
Sbjct 2148449 CCTCCTCTCAATCGCAGCACCAAGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAG 2148508
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || | || || ||||||||||||||||| || || | ||| ||||| | ||
Sbjct 2148509 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGAGGG 2148568
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||| |||||| ||| ||| |||| | | | ||||| || | ||||||
Sbjct 2148569 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCCACC 2148628
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| || || || || ||||| |||||||| |||||
Sbjct 2148629 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148675
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| | ||| | ||||| || | ||| |||||| || || ||||| ||||
Sbjct 2148677 CCTCCTCTCAGACGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2148736
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || |||||||||||||||||||| || || | |||||| || | ||
Sbjct 2148737 AGAGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGATCAGGAGGA 2148796
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||| |||| | ||| |||| | ||| | || | | ||||| || | ||| ||
Sbjct 2148797 ATACCCTCTTTGT-CTTGAATTTTGGCTTTCACATTCTCAATGGTGTCACTTGGTTCAAC 2148855
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| || || || || ||||| |||||||| |||||
Sbjct 2148856 CTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148903
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| | ||| | ||||| || | ||| |||||| || || ||||| ||||
Sbjct 2148905 CCTCCTCTCAGACGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2148964
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || ||||||||||||||||| || || || | ||||||||| | ||
Sbjct 2148965 AGAGTGCGGCCATCTTCTAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 2149024
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||||| ||| ||| || || | | | | ||||| |||| || ||
Sbjct 2149025 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 2149084
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| | ||||||||||| || || || ||||| |||||||| ||||||||
Sbjct 2149085 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCATTTT 2149134
>seq1134
Length=200589
Score = 98.7 bits (108), Expect = 1e-15
Identities = 77/93 (83%), Gaps = 7/93 (8%)
Strand=Plus/Plus
Query 56993 TTATGAAAAA-------TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGAC 57045
|||||||||| |||||||| || | | |||||||||| |||||||||||||||
Sbjct 3386 TTATGAAAAAAAATTCTTTTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGAC 3445
Query 57046 AGGCGGACATACTCACCACTATACTACCGAGGA 57078
|||||| |||||||||||||||||| ||||||
Sbjct 3446 AGGCGGGGATACTCACCACTATACTAACGAGGA 3478
>seq18200
Length=379000
Score = 93.3 bits (102), Expect = 5e-14
Identities = 71/84 (85%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054
|| || |||| |||| || | | |||||||||| ||||||||||||||||||||| |
Sbjct 138030 ATAAAGAATTGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 137971
Query 57055 TACTCACCACTATACTACCGAGGA 57078
||||||||||||||||| ||||||
Sbjct 137970 TACTCACCACTATACTAACGAGGA 137947
>seq666
Length=777973
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||
Sbjct 693033 AAAGATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 693092
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||| ||||||
Sbjct 693093 TCACCACTATACTAACGAGGA 693113
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||
Sbjct 695373 AAACATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 695432
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||| ||||||
Sbjct 695433 TCACCACTATACTAACGAGGA 695453
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 57000 AAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059
|||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||||
Sbjct 697140 AAATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTC 697199
Query 57060 ACCACTATACTACCGAGGA 57078
|||||||||||| ||||||
Sbjct 697200 ACCACTATACTAACGAGGA 697218
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | ||| |||||| ||||||||||||||||||||| |||||||||
Sbjct 689112 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 689171
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 689172 ACTATACTAACGAGGA 689187
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 692728 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 692787
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 692788 ATACTAACGAGGA 692800
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | ||| |||||| ||||||||||||||||||||| |||||||||
Sbjct 699801 TTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 699860
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 699861 ACTATACTAACGAGGA 699876
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct 687736 TTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 687795
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 687796 CTATACTAACGAGGA 687810
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 691179 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 691238
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 691239 TACTAACGAGGA 691250
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 697416 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 697475
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 697476 TACTAACGAGGA 697487
>seq15175
Length=50825
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
||||||| || | |||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 20639 CTCCTCGTCAGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGGCCACTA 20580
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 20579 TACTAACGAGGACTG 20565
>seq5960
Length=102094
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 57001 AATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 57060
||||| |||| || | | ||| |||||| ||||||||||||||||||||| |||||||
Sbjct 294 AATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCA 353
Query 57061 CCACTATACTACCGAGGA 57078
||||||||||| ||||||
Sbjct 354 CCACTATACTAACGAGGA 371
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/84 (85%), Gaps = 3/84 (4%)
Strand=Plus/Plus
Query 56998 AAAAATTTT---CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054
|||| |||| |||| || | | |||||||||| ||||||||||||||||||||| |
Sbjct 1915 AAAAGTTTTTGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1974
Query 57055 TACTCACCACTATACTACCGAGGA 57078
||||||||||||||||| ||||||
Sbjct 1975 TACTCACCACTATACTAACGAGGA 1998
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 57001 AATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 57060
|||| |||| || | | ||| |||||| ||||||||||||||||||||| |||||||
Sbjct 3803 AATTAACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCA 3862
Query 57061 CCACTATACTACCGAGGA 57078
||||||||||| ||||||
Sbjct 3863 CCACTATACTAACGAGGA 3880
>seq16312
Length=416328
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 26088 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26029
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 26028 TACTAACGAGGA 26017
>seq15988
Length=416377
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 125931 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 125872
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 125871 TACTAACGAGGA 125860
>seq13196
Length=56110
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061
|||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 1078 ATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 1019
Query 57062 CACTATACTACCGAGGA 57078
|||||||||| ||||||
Sbjct 1018 CACTATACTAACGAGGA 1002
>seq24754
Length=191786
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
||||||| | | |||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 22163 CTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGGCCACTA 22104
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 22103 TACTAACGAGGACTG 22089
>seq22663
Length=211218
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
||||||| | | |||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 188008 CTCCTCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGGCCACTA 187949
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 187948 TACTAACGAGGACTG 187934
>seq14478
Length=496152
Score = 86.0 bits (94), Expect = 7e-12
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
||||||| | ||| || | | |||||||||| ||||||||||||||||||||| |||
Sbjct 420240 AAAAATTGGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 420181
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||| ||||||
Sbjct 420180 CTTACCACTATACTAACGAGGA 420159
>seq4874
Length=535125
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|| || || || ||||| || | || || || | || || ||||| || ||||| ||
Sbjct 501993 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCAAAG 501934
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || | |||||| |||| || | || |||||| || ||| || ||| | ||
Sbjct 501933 ATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTATCTTGGATCTTGGCTTTAACATTC 501874
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | |||||||| | ||||| || | || ||||||||||| || || || || |||
Sbjct 501873 TCAATAGTGTCGCTGGGCTCCACCTCAAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACA 501814
Query 42198 AAGATTTGCATTTT 42211
||||| ||||| ||
Sbjct 501813 AAGATCTGCATATT 501800
>seq18712
Length=531564
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
||||||| | | |||||||||| ||||| || ||||||||||||| ||||| ||||||
Sbjct 65530 CTCCTCGTCGGGGAATCGAACCCCGGTCTTCCACGTGACAGGCGGAGATACTGGCCACTA 65471
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 65470 TACTAACGAGGACTG 65456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543035848430400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |