Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 107 2e-18
>seq18889
Length=1054283
Score = 107 bits (118), Expect = 2e-18
Identities = 706/1113 (63%), Gaps = 37/1113 (3%)
Strand=Plus/Minus
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
|| || ||||| | ||| || || || || || ||||| | || | ||||||| | ||
Sbjct 965173 GGAACAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGAGAGTGTACAACAACACTGCA 965114
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
||||| |||||||| ||||| | | |||| | || || | || | |||||
Sbjct 965113 CGCTATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCTTTGCCATTTACTTGGAGCCA 965054
Query 94201 TGGCACGCGGACGTGCAGG-CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGA 94259
|||||| || ||| | ||||| | || ||| |||||| || || || | |
Sbjct 965053 TGGCACTTTGATGTGTTTGACTTTCTT-GAGCTGAAGAAGAACACTGGTAAAGAGGAGCA 964995
Query 94260 GAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319
|||||| ||||||||||||| || || ||| | || ||||| || ||||| | || ||
Sbjct 964994 GAGGGCGCGAGACCTCTTCTATGCCCTATGGATCCCTGACCTGTTCATGAAGAGAGTGGA 964935
Query 94320 GAAAAACTCCGCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377
|| ||| | |||| ||||| | ||||||| ||| || || || || || |
Sbjct 964934 AAACAACCAGGACTGG--TCTTTGATGTGTCCCAGTGAGTGCCCTGGGTTGGATGAGTGT 964877
Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAG 94437
|| || | ||||| | |||| | || || ||| | |||| | | | | |
Sbjct 964876 TGGGGGGAGGAGTTTGAGAAGCTGTACACACGATATGAACAGGAGGGTAGAGTGAAGCGG 964817
Query 94438 GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACG 94497
|| | | ||| | || ||||| || ||| | || ||| || ||||| ||
Sbjct 964816 GTGGTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACAGAAACGGGAACA 964757
Query 94498 CCCTACATCTTGTTCAAGGACTC-TGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556
|| ||||| |||| ||| || | ||| ||| ||| ||||||||| | | ||
Sbjct 964756 CCTTACATGTTGTACAAAGATGCCTGT-AACAGGAAGAGTAACCAGCAGAATTTGGGCAC 964698
Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616
||||| || || ||||||| |||||||| |||||||| || || | ||
Sbjct 964697 CATCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTAGC 964638
Query 94617 TGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTAC 94676
|| |||||| ||| ||| || || || || | || ||| ||| | ||
Sbjct 964637 CGTCTGTAACTTGGCCTCAATTG--CTCTCAACAT--GT-----ATGT-TACTCCAGAAC 964588
Query 94677 TGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAA 94736
|| | || ||| | | |||||| || | | || || || || ||
Sbjct 964587 -GCACCTTT-GATTTCAAAAAGCTTGCCTCAGTCACTAAAGTAATTGTAAGAAATCTCAA 964530
Query 94737 CAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCA 94796
| | | || |||| |||| |||||| || || || || ||||| |||||| | ||
Sbjct 964529 TAAGATCATTGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCCA 964470
Query 94797 TCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCC 94856
|||| || || ||||| || |||||| | || || || | | | |||||| ||
Sbjct 964469 CAGGCCAATTGGGATCGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCC 964410
Query 94857 CTACGAC---TCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTA 94913
| || |||| | | | || | | |||| | | || || |||| ||| || ||
Sbjct 964409 ATTTGAAAGTTCTGAAGCC-CAGCTGCT--GAATATCCAGATCTTTGAAACCATCTACTA 964353
Query 94914 CGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972
| ||| || | ||| | | | | ||||| | |||||| ||| | || | |
Sbjct 964352 TGCTGCCCTGGAGGCAAGCTG-CGAGTTGGCAGAAAAGGACGG---GCCTTATGAGACAT 964297
Query 94973 TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCT 95032
|| || || || || ||||||| | || | |||| | |||| | ||||
Sbjct 964296 ACCCAGGCTCCCCAGTGAGTAGGGGCATTCTGCAATACGACATGTGGGAAAAGGTGCCCA 964237
Query 95033 CGGGTCTGTACGACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAAAA 95089
| | || | |||||| ||||| || | | | ||| | ||||||||||||| |
Sbjct 964236 CTGAGCTCTGGGACTGG-AAGCTGCTTAAGGAGAAGAT--TGCTAAACACGGTGTGAGGA 964180
Query 95090 ACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACG 95149
|| ||| | ||||||| |||||||| |||||||| ||||| || ||||||||||| |
Sbjct 964179 ACAGCCTGTTGTTGGCCCCTATGCCCACAGCCTCCACAGCGCAAATACTTGGCAACAATG 964120
Query 95150 AGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182
|||| ||||| ||| |||| |||| | ||||
Sbjct 964119 AGTCCATCGAAGCCTACACCAGCAACATCTACA 964087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494562043917600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |