Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq18889 107 2e-18 >seq18889 Length=1054283 Score = 107 bits (118), Expect = 2e-18 Identities = 706/1113 (63%), Gaps = 37/1113 (3%) Strand=Plus/Minus Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 || || ||||| | ||| || || || || || ||||| | || | ||||||| | || Sbjct 965173 GGAACAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGAGAGTGTACAACAACACTGCA 965114 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 ||||| |||||||| ||||| | | |||| | || || | || | ||||| Sbjct 965113 CGCTATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCTTTGCCATTTACTTGGAGCCA 965054 Query 94201 TGGCACGCGGACGTGCAGG-CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGA 94259 |||||| || ||| | ||||| | || ||| |||||| || || || | | Sbjct 965053 TGGCACTTTGATGTGTTTGACTTTCTT-GAGCTGAAGAAGAACACTGGTAAAGAGGAGCA 964995 Query 94260 GAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319 |||||| ||||||||||||| || || ||| | || ||||| || ||||| | || || Sbjct 964994 GAGGGCGCGAGACCTCTTCTATGCCCTATGGATCCCTGACCTGTTCATGAAGAGAGTGGA 964935 Query 94320 GAAAAACTCCGCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 || ||| | |||| ||||| | ||||||| ||| || || || || || | Sbjct 964934 AAACAACCAGGACTGG--TCTTTGATGTGTCCCAGTGAGTGCCCTGGGTTGGATGAGTGT 964877 Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAG 94437 || || | ||||| | |||| | || || ||| | |||| | | | | | Sbjct 964876 TGGGGGGAGGAGTTTGAGAAGCTGTACACACGATATGAACAGGAGGGTAGAGTGAAGCGG 964817 Query 94438 GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACG 94497 || | | ||| | || ||||| || ||| | || ||| || ||||| || Sbjct 964816 GTGGTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACAGAAACGGGAACA 964757 Query 94498 CCCTACATCTTGTTCAAGGACTC-TGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556 || ||||| |||| ||| || | ||| ||| ||| ||||||||| | | || Sbjct 964756 CCTTACATGTTGTACAAAGATGCCTGT-AACAGGAAGAGTAACCAGCAGAATTTGGGCAC 964698 Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616 ||||| || || ||||||| |||||||| |||||||| || || | || Sbjct 964697 CATCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTAGC 964638 Query 94617 TGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTAC 94676 || |||||| ||| ||| || || || || | || ||| ||| | || Sbjct 964637 CGTCTGTAACTTGGCCTCAATTG--CTCTCAACAT--GT-----ATGT-TACTCCAGAAC 964588 Query 94677 TGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAA 94736 || | || ||| | | |||||| || | | || || || || || Sbjct 964587 -GCACCTTT-GATTTCAAAAAGCTTGCCTCAGTCACTAAAGTAATTGTAAGAAATCTCAA 964530 Query 94737 CAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCA 94796 | | | || |||| |||| |||||| || || || || ||||| |||||| | || Sbjct 964529 TAAGATCATTGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCCA 964470 Query 94797 TCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCC 94856 |||| || || ||||| || |||||| | || || || | | | |||||| || Sbjct 964469 CAGGCCAATTGGGATCGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCC 964410 Query 94857 CTACGAC---TCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTA 94913 | || |||| | | | || | | |||| | | || || |||| ||| || || Sbjct 964409 ATTTGAAAGTTCTGAAGCC-CAGCTGCT--GAATATCCAGATCTTTGAAACCATCTACTA 964353 Query 94914 CGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972 | ||| || | ||| | | | | ||||| | |||||| ||| | || | | Sbjct 964352 TGCTGCCCTGGAGGCAAGCTG-CGAGTTGGCAGAAAAGGACGG---GCCTTATGAGACAT 964297 Query 94973 TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCT 95032 || || || || || ||||||| | || | |||| | |||| | |||| Sbjct 964296 ACCCAGGCTCCCCAGTGAGTAGGGGCATTCTGCAATACGACATGTGGGAAAAGGTGCCCA 964237 Query 95033 CGGGTCTGTACGACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAAAA 95089 | | || | |||||| ||||| || | | | ||| | ||||||||||||| | Sbjct 964236 CTGAGCTCTGGGACTGG-AAGCTGCTTAAGGAGAAGAT--TGCTAAACACGGTGTGAGGA 964180 Query 95090 ACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACG 95149 || ||| | ||||||| |||||||| |||||||| ||||| || ||||||||||| | Sbjct 964179 ACAGCCTGTTGTTGGCCCCTATGCCCACAGCCTCCACAGCGCAAATACTTGGCAACAATG 964120 Query 95150 AGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182 |||| ||||| ||| |||| |||| | |||| Sbjct 964119 AGTCCATCGAAGCCTACACCAGCAACATCTACA 964087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494562043917600