Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq10742 105 7e-18
>seq10742
Length=3397572
Score = 105 bits (116), Expect = 7e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| |||| || || || | | | || ||||||||||||||||||| ||
Sbjct 2148449 CCTCCTCTCAATCGCAGCACCAAGTGGAGGGTGGATTCCTTTTGAATGTTGTAGT--CTG 2148506
Query 138448 ATAGTACGCGA--GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505
| || |||| || || || || ||||| | | || || | ||||||||| ||||
Sbjct 2148507 AGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGAG 2148566
Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
| ||||| |||||||| ||| ||| || | | ||| | |||||| | | ||||
Sbjct 2148567 GGATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCCA 2148626
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || |||||||| || || ||||| ||||||||
Sbjct 2148627 CCTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148675
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || ||| | || | || | | | |||||||| || |||||||||||
Sbjct 2148905 CCTCCTCTCAGACGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2148964
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || || || ||||| | | | || || | ||| ||||| |||||
Sbjct 2148965 AGAGTGCGGCCATCTTCTAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 2149024
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| || || ||| || || | | ||| | ||||| ||| ||| ||
Sbjct 2149025 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 2149084
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||||||||| || || ||||| ||||||||
Sbjct 2149085 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCAT 2149131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496100742523200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |