Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq22308 107 3e-18
seq19444 95.1 2e-14
>seq22308
Length=220414
Score = 107 bits (118), Expect = 3e-18
Identities = 170/244 (70%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 8936 GCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCC 8995
|| || || | |||||| || || || || ||||| ||||| || |||||||| |
Sbjct 57153 GCCGTGTTGATGATGTCGAAGCCCACCGGGCCTCCGAAAGTGCTTGGCTTCCAGTATTCA 57094
Query 8996 GGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATG 9055
|||||||||||| |||| ||||||| ||||| | ||| || || || |||| || |
Sbjct 57093 GGGGAGCAGATGGCGTTTCCCATGAGGCCTTTGAGGGAGAAGGGGGCACCCATTTCCACC 57034
Query 9056 ATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGT 9115
||| |||| ||||| ||||| | | | || || ||||| | | || | ||| ||
Sbjct 57033 ATGGTCTCCCCGAAAATGGCGTCCTGTCTGGGCTTCTCGACCAGCAGACCCGGGTACAGC 56974
Query 9116 TCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
|| || || || |||| ||||| | | ||||| ||| || || || || || |||
Sbjct 56973 TCCACGGCATCCACGTGTCCATACATTTCCTCCAAAATGGCTGCCATTTCTTTATCTCCT 56914
Query 9176 ACAA 9179
||||
Sbjct 56913 ACAA 56910
>seq19444
Length=2062287
Score = 95.1 bits (104), Expect = 2e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992
||||| | ||||| ||||| || || || | || || || ||||| ||||||||||||
Sbjct 1396090 GTTGCAGAATTCACTATGTCAAATCCAACTTTGCCTCCAAATGTGCTTGGTTTCCAGTAC 1396031
Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052
|| || || || |||| ||| || ||||||| ||||| |||||||||| |||
Sbjct 1396030 AAGGGAGAACATATAGGGTTCCCCAATAGTCCTTTCAGAGAAAAGGGAGCCCCCATCTCC 1395971
Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAG 9112
| |||||||| || || | || || ||||| | ||| || | | || |||| ||
Sbjct 1395970 ACCATGCTCTCTCCAAATACTGCTCCTGGACGTGTTTTCTCCAACAAGAGACCAGGATAA 1395911
Query 9113 AGTTCGACAGCCTCGACGTCGCCAT 9137
| ||| | ||| | | ||| ||||
Sbjct 1395910 AATTCAAGAGCATTTATGTCACCAT 1395886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723492245604000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |