Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq22308 107 3e-18 seq19444 95.1 2e-14 >seq22308 Length=220414 Score = 107 bits (118), Expect = 3e-18 Identities = 170/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 8936 GCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCC 8995 || || || | |||||| || || || || ||||| ||||| || |||||||| | Sbjct 57153 GCCGTGTTGATGATGTCGAAGCCCACCGGGCCTCCGAAAGTGCTTGGCTTCCAGTATTCA 57094 Query 8996 GGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATG 9055 |||||||||||| |||| ||||||| ||||| | ||| || || || |||| || | Sbjct 57093 GGGGAGCAGATGGCGTTTCCCATGAGGCCTTTGAGGGAGAAGGGGGCACCCATTTCCACC 57034 Query 9056 ATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGT 9115 ||| |||| ||||| ||||| | | | || || ||||| | | || | ||| || Sbjct 57033 ATGGTCTCCCCGAAAATGGCGTCCTGTCTGGGCTTCTCGACCAGCAGACCCGGGTACAGC 56974 Query 9116 TCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || || || || |||| ||||| | | ||||| ||| || || || || || ||| Sbjct 56973 TCCACGGCATCCACGTGTCCATACATTTCCTCCAAAATGGCTGCCATTTCTTTATCTCCT 56914 Query 9176 ACAA 9179 |||| Sbjct 56913 ACAA 56910 >seq19444 Length=2062287 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 ||||| | ||||| ||||| || || || | || || || ||||| |||||||||||| Sbjct 1396090 GTTGCAGAATTCACTATGTCAAATCCAACTTTGCCTCCAAATGTGCTTGGTTTCCAGTAC 1396031 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 || || || || |||| ||| || ||||||| ||||| |||||||||| ||| Sbjct 1396030 AAGGGAGAACATATAGGGTTCCCCAATAGTCCTTTCAGAGAAAAGGGAGCCCCCATCTCC 1395971 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAG 9112 | |||||||| || || | || || ||||| | ||| || | | || |||| || Sbjct 1395970 ACCATGCTCTCTCCAAATACTGCTCCTGGACGTGTTTTCTCCAACAAGAGACCAGGATAA 1395911 Query 9113 AGTTCGACAGCCTCGACGTCGCCAT 9137 | ||| | ||| | | ||| |||| Sbjct 1395910 AATTCAAGAGCATTTATGTCACCAT 1395886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723492245604000