Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 695 0.0
seq25415 533 2e-146
>seq21827
Length=6214
Score = 695 bits (770), Expect = 0.0
Identities = 748/987 (76%), Gaps = 2/987 (0%)
Strand=Plus/Minus
Query 7535 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGA 7594
||||| || || ||||||||||| ||||| ||||| || ||||| |||||||| || |
Sbjct 6016 GCAGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAG 5957
Query 7595 CCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATG 7654
||||||||||| | || |||||||| || | ||||||||||||| ||||| |
Sbjct 5956 TTAGCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 5897
Query 7655 GACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTG 7714
|| |||||||| |||||||| || | ||| || ||||| ||||||| ||| | |||||||
Sbjct 5896 GATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTG 5837
Query 7715 AACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTG 7774
||||| || || || || ||||| || || ||||||||||| | ||||| |||||||||
Sbjct 5836 AACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTG 5777
Query 7775 AACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAG 7834
|| ||| ||||||||||||| || ||||| || || |||||||| ||||| ||||||
Sbjct 5776 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAG 5717
Query 7835 GTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCA 7894
|| ||||| ||||||||||| | ||||| | || || ||| || ||||||||
Sbjct 5716 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 5657
Query 7895 CGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAG 7954
| | || | ||| ||||| | ||||||||||| |||||||| || || || || ||
Sbjct 5656 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 5597
Query 7955 ACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAG 8014
|||||||| ||||| | |||||| || |||||||| |||||||||||||| ||||||||
Sbjct 5596 ACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAAT 5537
Query 8015 ACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCT 8074
|||| |||| ||||||| ||||||||||| || ||||||||| ||||||| || |||
Sbjct 5536 ACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCT 5477
Query 8075 TGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCT 8134
||||| | ||||||| | ||| ||||||| || || ||||| ||||| || |||||
Sbjct 5476 TGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 5417
Query 8135 ACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTAT 8194
||| ||||| || |||||||| |||||| || ||||||||||||||||||||| ||
Sbjct 5416 ACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAA 5357
Query 8195 GCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGC 8254
| | ||| | | ||||| | | || || | |||||||||| ||||| | |
Sbjct 5356 CAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 5297
Query 8255 CACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAA 8314
|| ||||||| ||||| |||||||| || || || || || | ||| || || ||||
Sbjct 5296 CATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGAA 5237
Query 8315 GAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGT 8374
| ||||| || |||||||| || || ||||| ||||| | || || |||| || |||
Sbjct 5236 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGT 5177
Query 8375 TCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAAT 8433
||||| || || ||||| || || ||||| ||||| | |||||||| || || ||| |
Sbjct 5176 TCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA- 5118
Query 8434 AGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATT 8493
|| || | | | ||||| ||||||| ||||| ||||| || | || ||||| ||
Sbjct 5117 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 5058
Query 8494 GTTGGTGGAGGTTACCCAGTTACAGAA 8520
| ||| ||||| ||||||||||||
Sbjct 5057 TTCAGTGCTGGTTATCCAGTTACAGAA 5031
>seq25415
Length=1491
Score = 533 bits (590), Expect = 2e-146
Identities = 728/1014 (72%), Gaps = 2/1014 (0%)
Strand=Plus/Minus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||||||| || | || | || || ||||| |||| || ||||||||| || |||||
Sbjct 1378 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 1319
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| |||||||| ||||| | |||||| || || || || || ||||| ||||| |||
Sbjct 1318 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTC 1259
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || || ||||| |||||||| | ||| || || ||||| |||||||| || | ||
Sbjct 1258 TCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGTAGA 1199
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| || || ||||| | | |||| | |||| | ||| | || || |||||
Sbjct 1198 TTCAGGGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 1139
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
| |||||||||||||| |||||| |||||| || || | |||||||| || |||||
Sbjct 1138 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 1079
Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622
|| || ||||| |||||||| ||||| || || || |||| || || | ||| ||| |
Sbjct 1078 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCCCGG 1019
Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682
|| ||||||| |||||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct 1018 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATA 959
Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742
|| || |||| || | || || | || || || |||||||||||||| ||||| |
Sbjct 958 GCGCATAGCAGAGCAGCGCCCAATACCCCAGCAACTCCCATCATATGAAATGGGTTCAAT 899
Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802
||||| || || || || || | ||||| | ||| || ||||| || || ||||||||
Sbjct 898 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 839
Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862
|||||||||||||||| ||||| || || ||||| || || || ||||| |||||
Sbjct 838 CTTGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAGGAATACAGAAACAAAA 779
Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921
|| ||||| ||||| || || ||||||||||| || || || | | || ||| || ||
Sbjct 778 ACCGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGTA-ATTGAACAGATCGAGC 720
Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981
| ||||| || || | |||||||||||| || | || || ||||| || || |||||
Sbjct 719 AAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGAAGAGCAACAAA 660
Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041
|| ||| || || || | ||| ||| || |||||||| || ||||| || |||||
Sbjct 659 AGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGGCCCCA 600
Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101
||| | | | || ||| | | | | ||||||||| || || || || || | |||
Sbjct 599 TAGTAACAACAAAGAGTGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCGGTTAAGAA 540
Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161
|| || || || | ||| ||| || | || || || ||||| || || || ||
Sbjct 539 GTTGCAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTACAAAGGT 480
Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221
||| || || | |||||| || | || | || ||| ||| || || | ||||| ||
Sbjct 479 TGTACCTGTAAACCAACCCCCTACGGCGAAATAGGCACAAGGAAAGAGCAATAGACCGGA 420
Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275
|||||| ||||||||||| | || | | | ||||||||| | | ||||||
Sbjct 419 CCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621922142846400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |