Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq18889 134 2e-26 seq20084 96.9 4e-15 seq22773 89.7 6e-13 >seq18889 Length=1054283 Score = 134 bits (148), Expect = 2e-26 Identities = 581/910 (64%), Gaps = 19/910 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| | || | | |||||||||| || | ||||| ||||||||| Sbjct 964089 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAG 964148 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 ||||||||||| || |||| | |||||||| | | ||| ||| ||| Sbjct 964149 GCTGTGGGCATAGGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCC 964208 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT---CCCACATATCAAACTGG 116079 || || | |||||| || |||| || | ||| ||||||| || | || Sbjct 964209 TTAAGCAGCTTCCAGTCCCAG---AGCTCAGTGGGCACCTTTTCCCACATGTCGTATTGC 964265 Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139 || || || | |||| || || |||||||||| || || || || ||| Sbjct 964266 AGAATGCCCCTACTCACTGGGGAGCCTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCC 964325 Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 || ||| |||| ||||| ||||| || | || || || ||||| || | ||||| Sbjct 964326 AACTCGCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAGC 964385 Query 116200 GCCTTGGCCTCGTCGGAA---TCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAG 116255 || ||| || ||| ||||| | || | ||| | || || |||| || || Sbjct 964386 AGCTGGGCTTCA---GAACTTTCAAATG-GATAACGCATGAGGATGAAGGCATCTGCAAG 964441 Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 116315 ||| || ||||||| |||||||| | || | | | || || || || || Sbjct 964442 ACCCTGCACACCGATCCCAATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAAC 964501 Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 116375 || || | || | || || | | |||| |||||| | | || || |||| | Sbjct 964502 TGGGTAGTAGTTAATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTGA 964561 Query 116376 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 116435 |||||||| | ||||||| |||| ||| | | |||||| | || || || Sbjct 964562 GGCAAGCTTTTTGAAATCAAAGGTGCGT---TCTGGAGTAACATACATGTTGAGAGCAAT 964618 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 ||| |||| ||||| || | ||||| || || ||||| | ||| || || || Sbjct 964619 TGAGGCCAAGTTACAGACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCA 964678 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 ||| || | || ||||||||||| |||| || || ||| ||||||| ||||| Sbjct 964679 CAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATC 964738 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATAC 116615 ||||| | ||| || || || ||||| || || || |||| | || || | ||| || Sbjct 964739 TTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATACCACAC 964798 Query 116616 AT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 116674 | | | | || | || || || ||| ||||||| || || |||||| || Sbjct 964799 CTGCTGAGCCTTGACCACCCGC-TTCACTCTACCCTCCTGTTCATATCGTGTGTACAGCT 964857 Query 116675 CCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734 ||||||||| || ||| | ||| | ||| || || | ||||| | | || Sbjct 964858 TCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGACACATCAAAG 964917 Query 116735 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 116794 |||| | | || || | ||||||||| ||||| |||||||| || || ||| Sbjct 964918 ACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAGA 964977 Query 116795 AGAGATCCCG 116804 |||| || || Sbjct 964978 AGAGGTCTCG 964987 >seq20084 Length=15297 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| ||| ||| ||||| || ||||| ||| || ||||| || || || |||| Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||| ||||||||| || || || |||||||||||||||||||||||| || || | Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820 Query 127659 CAAATAGACGCTC 127671 | | | |||||| Sbjct 12821 CCACCACACGCTC 12833 >seq22773 Length=730387 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || |||||| | ||||| | ||||| | |||||||||| || | ||| ||||| || ||| Sbjct 299251 TAAATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCGAGGATCTGGGCAGTAGAG 299310 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||||||||| || |||| ||| |||||||| Sbjct 299311 GCTGTGGGCATTGGGGCCAGGAGGAGGCTGTT 299342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613307350029600