Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 134 2e-26
seq20084 96.9 4e-15
seq22773 89.7 6e-13
>seq18889
Length=1054283
Score = 134 bits (148), Expect = 2e-26
Identities = 581/910 (64%), Gaps = 19/910 (2%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | || | | |||||||||| || | ||||| |||||||||
Sbjct 964089 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAG 964148
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
||||||||||| || |||| | |||||||| | | ||| ||| |||
Sbjct 964149 GCTGTGGGCATAGGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCC 964208
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT---CCCACATATCAAACTGG 116079
|| || | |||||| || |||| || | ||| ||||||| || | ||
Sbjct 964209 TTAAGCAGCTTCCAGTCCCAG---AGCTCAGTGGGCACCTTTTCCCACATGTCGTATTGC 964265
Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139
|| || || | |||| || || |||||||||| || || || || |||
Sbjct 964266 AGAATGCCCCTACTCACTGGGGAGCCTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCC 964325
Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199
|| ||| |||| ||||| ||||| || | || || || ||||| || | |||||
Sbjct 964326 AACTCGCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAGC 964385
Query 116200 GCCTTGGCCTCGTCGGAA---TCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAG 116255
|| ||| || ||| ||||| | || | ||| | || || |||| || ||
Sbjct 964386 AGCTGGGCTTCA---GAACTTTCAAATG-GATAACGCATGAGGATGAAGGCATCTGCAAG 964441
Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 116315
||| || ||||||| |||||||| | || | | | || || || || ||
Sbjct 964442 ACCCTGCACACCGATCCCAATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAAC 964501
Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 116375
|| || | || | || || | | |||| |||||| | | || || |||| |
Sbjct 964502 TGGGTAGTAGTTAATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTGA 964561
Query 116376 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 116435
|||||||| | ||||||| |||| ||| | | |||||| | || || ||
Sbjct 964562 GGCAAGCTTTTTGAAATCAAAGGTGCGT---TCTGGAGTAACATACATGTTGAGAGCAAT 964618
Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495
||| |||| ||||| || | ||||| || || ||||| | ||| || || ||
Sbjct 964619 TGAGGCCAAGTTACAGACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCA 964678
Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555
||| || | || ||||||||||| |||| || || ||| ||||||| |||||
Sbjct 964679 CAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATC 964738
Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATAC 116615
||||| | ||| || || || ||||| || || || |||| | || || | ||| ||
Sbjct 964739 TTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATACCACAC 964798
Query 116616 AT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 116674
| | | | || | || || || ||| ||||||| || || |||||| ||
Sbjct 964799 CTGCTGAGCCTTGACCACCCGC-TTCACTCTACCCTCCTGTTCATATCGTGTGTACAGCT 964857
Query 116675 CCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734
||||||||| || ||| | ||| | ||| || || | ||||| | | ||
Sbjct 964858 TCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGACACATCAAAG 964917
Query 116735 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 116794
|||| | | || || | ||||||||| ||||| |||||||| || || |||
Sbjct 964918 ACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAGA 964977
Query 116795 AGAGATCCCG 116804
|||| || ||
Sbjct 964978 AGAGGTCTCG 964987
>seq20084
Length=15297
Score = 96.9 bits (106), Expect = 4e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
||||||| ||| ||| ||||| || ||||| ||| || ||||| || || || ||||
Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658
||| ||||||||| || || || |||||||||||||||||||||||| || || |
Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820
Query 127659 CAAATAGACGCTC 127671
| | | ||||||
Sbjct 12821 CCACCACACGCTC 12833
>seq22773
Length=730387
Score = 89.7 bits (98), Expect = 6e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| |||||| | ||||| | ||||| | |||||||||| || | ||| ||||| || |||
Sbjct 299251 TAAATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCGAGGATCTGGGCAGTAGAG 299310
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
||||||||||| || |||| ||| ||||||||
Sbjct 299311 GCTGTGGGCATTGGGGCCAGGAGGAGGCTGTT 299342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613307350029600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |