Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq18889 136 6e-27 >seq18889 Length=1054283 Score = 136 bits (150), Expect = 6e-27 Identities = 335/500 (67%), Gaps = 10/500 (2%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||| ||||| ||||||||||||| ||| || | |||| || |||||||||| Sbjct 964661 CTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACT 964720 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 ||| | |||||||| || ||||||| |||| | || |||| | || ||||||| Sbjct 964721 CTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTC 964780 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAGA 205059 | ||| ||||| | |||||| |||| ||||||| | |||| | Sbjct 964781 TATGATGGCATACCACACCTGCTGAGCCTTGACCACCCGCTTCACT--CTACCCTCCTGT 964838 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATC-AGCCCTGGAC 205118 || ||| |||||||||| | |||| || || | || |||| | ||| || | Sbjct 964839 -TCATATCGTGTGTACAGCTTCTCAAACTCCTCCCCCCA-ACACTCATCCAACCCAGGGC 964896 Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178 | | |||||||||||| |||||| ||| | || || ||| |||| ||| ||||||| Sbjct 964897 ACTCACTGGGACACATCAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGT 964956 Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238 | |||||| ||| | || || || || || ||||| | || | ||| ||||| Sbjct 964957 CAGGGATCCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTGTTCT 965016 Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | |||| || || ||| | | | || |||||| ||||| || | | ||| | Sbjct 965017 TCTTCAGCTCAAG-AAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAG 965075 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || || || | || || ||||| |||||||| ||| | | |||| | |||| | Sbjct 965076 GCACCCGGTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTC 965135 Query 205358 AGCATCGGCACCAGACCGTT 205377 ||||||||||| ||||| || Sbjct 965136 AGCATCGGCACAAGACCATT 965155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794896178193600