Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 136 6e-27
>seq18889
Length=1054283
Score = 136 bits (150), Expect = 6e-27
Identities = 335/500 (67%), Gaps = 10/500 (2%)
Strand=Plus/Plus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
|||||| ||||| ||||||||||||| ||| || | |||| || ||||||||||
Sbjct 964661 CTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACT 964720
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002
||| | |||||||| || ||||||| |||| | || |||| | || |||||||
Sbjct 964721 CTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTC 964780
Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAGA 205059
| ||| ||||| | |||||| |||| ||||||| | |||| |
Sbjct 964781 TATGATGGCATACCACACCTGCTGAGCCTTGACCACCCGCTTCACT--CTACCCTCCTGT 964838
Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATC-AGCCCTGGAC 205118
|| ||| |||||||||| | |||| || || | || |||| | ||| || |
Sbjct 964839 -TCATATCGTGTGTACAGCTTCTCAAACTCCTCCCCCCA-ACACTCATCCAACCCAGGGC 964896
Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178
| | |||||||||||| |||||| ||| | || || ||| |||| ||| |||||||
Sbjct 964897 ACTCACTGGGACACATCAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGT 964956
Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238
| |||||| ||| | || || || || || ||||| | || | ||| |||||
Sbjct 964957 CAGGGATCCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTGTTCT 965016
Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297
| |||| || || ||| | | | || |||||| ||||| || | | ||| |
Sbjct 965017 TCTTCAGCTCAAG-AAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAG 965075
Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357
|| || || | || || ||||| |||||||| ||| | | |||| | |||| |
Sbjct 965076 GCACCCGGTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTC 965135
Query 205358 AGCATCGGCACCAGACCGTT 205377
||||||||||| ||||| ||
Sbjct 965136 AGCATCGGCACAAGACCATT 965155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794896178193600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |