Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq4874 140 8e-28
seq10742 132 1e-25
seq18279 87.8 4e-12
>seq4874
Length=535125
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || || || || |||| ||||||||| | | || | |||||
Sbjct 502243 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 502184
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| ||||||||||| || | |||||| || || ||| ||||| ||
Sbjct 502183 TTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 502124
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| ||| | |||||| | | || || |||| ||||| ||
Sbjct 502123 CTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 502064
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 502063 CTTCCCAGTGAGGGTTTTCACAAAGATCTG 502034
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || || || || |||| ||||||||| | | || | |||||
Sbjct 502471 CAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 502412
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| ||||||||||| || | |||||| || || ||| ||||| ||
Sbjct 502411 TTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 502352
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| ||| | |||||| | | || || |||| ||||| ||
Sbjct 502351 CTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 502292
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 502291 CTTCCCAGTGAGGGTTTTCACAAAGATCTG 502262
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||| ||||| || || || || |||| ||||||||||| | || | |||||
Sbjct 502927 CAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 502868
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| ||||| ||||| || | |||||| || || ||| ||||| ||
Sbjct 502867 TTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 502808
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| ||| | |||||| | | || || |||| ||||| ||
Sbjct 502807 CTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 502748
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 502747 CTTCCCAGTGAGGGTTTTCACAAAGATCTG 502718
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || || || || |||| ||||||||| | | || | |||||
Sbjct 502699 CAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 502640
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| ||||||||||| || | |||||| || || ||| ||||| ||
Sbjct 502639 TTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 502580
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| ||| | ||||| | | || || |||| || || ||
Sbjct 502579 CTGGATCTTGGCCTTCACGTTTTCAATAGTGTCACTGGGCTCCACCTCCAGAGTAATGGT 502520
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 502519 CTTCCCAGTGAGGGTTTTCACAAAGATCTG 502490
>seq10742
Length=3397572
Score = 132 bits (146), Expect = 1e-25
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||| || |||||||| |||| ||||||||||| | ||| | ||||||
Sbjct 2148692 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 2148751
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || ||||| || || | |||||| || ||| ||| || ||| ||
Sbjct 2148752 TCTAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGATCAGGAGGAATACCCTCTTTGTCT 2148811
Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||| ||| || ||||| || | |||||| ||| ||| || ||||| ||||| ||
Sbjct 2148812 TGAAT-TTTGGCTTTCACATTCTCAATGGTGTCACTTGGTTCAACCTCCAAAGTGATGGT 2148870
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 2148871 CTTCCCAGTCAGGGTCTTAACAAAGATCTG 2148900
Score = 131 bits (144), Expect = 4e-25
Identities = 160/218 (73%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||| || |||||||| |||| ||||||||||| | ||| | ||||||
Sbjct 2148920 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 2148979
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || || || || || | ||||||||| ||| || ||||| |||
Sbjct 2148980 TCTAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATACCTTCCTTATCC 2149039
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| ||| | ||||| | | || || ||||| ||||| ||
Sbjct 2149040 TGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACTTCCAAAGTGATGGTT 2149099
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||||| || || || || ||||| || || ||||||
Sbjct 2149100 TTACCAGTCAGGGTCTTAACAAAGATCTG---CATTTT 2149134
>seq18279
Length=91511
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/90 (82%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| |||| ||||||||| | || ||| | |||||| |||||||| || |||||||||
Sbjct 1809 CCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAG 1868
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| ||||||||||| || ||| ||||||
Sbjct 1869 ATCAGACGCTGCTGATCAGGAGGGATTCCT 1898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178527965446020
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