Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq18889 221 1e-52 seq20084 95.1 2e-14 >seq18889 Length=1054283 Score = 221 bits (244), Expect = 1e-52 Identities = 964/1498 (64%), Gaps = 48/1498 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| ||||| | || || |||| ||||| ||||| ||| | | Sbjct 965465 CCCACAGCACATGCTCATGAGAGTAGCTGTCGGAATCCACAACTCTGATATAGATGCAGC 965406 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||| ||| || | |||| | || ||||| || || | || || || | Sbjct 965405 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 965347 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| || || |||||||| | ||||| || ||||| | || | ||||| | Sbjct 965346 TCAACGCAGGCACTAACAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGATG 965287 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || |||||||||| | ||| || | ||||||| | ||||| || | || | Sbjct 965286 ACAGCATTGATGGCATTTATGACACACTGAAACAATGTGCTCTTATCTCTAAATCTGCAG 965227 Query 111850 GTGGTATCGGGAT-GCACATCCATGATGTCAGAGC--CAACAAGTCTCGTATTAGAGGTA 111906 | || || || | ||| | || | | ||| | || |||| | ||| || | Sbjct 965226 GAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATCAACAGGAAGTTAC--ATTGCTGGAA 965170 Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966 |||||||| | ||| ||||| || | || ||||| | || | ||| ||| || |||| Sbjct 965169 CAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGAGAGTGTACAACAACACTGCACGCT 965110 Query 111967 ATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 |||| |||||| ||| | || ||| | | || | || | |||||||||| Sbjct 965109 ATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCTTTGCCATTTACTTGGAGCCATGGC 965050 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 || ||| | | || || |||||| || ||| ||| | |||||| | || Sbjct 965049 ACTTTGATGTGTTTGACTTTCTTGAGCTGAAGAAGAACACTGGTAAAGAGGAGCAGAGGG 964990 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 || || ||||||| || || ||||| || || || |||||||||||||| || | | Sbjct 964989 CGCGAGACCTCTTCTATGCCCTATGGATCCCTGACCTGTTCATGAAGAGAGTGGAAAACA 964930 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGG 112201 | |||||| | | ||||| || | || | ||| | || || | ||| Sbjct 964929 ACCAGGACTGGTCTTTGATGTGTCCCAGTGAGTGCCCTGGGT-TGGATGAGTGTTGGGGG 964871 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||||||||||| || |||||| || || | || || | | || ||| ||| Sbjct 964870 -GAGGAGTTTGAGAAGCTGTACACACGATATGAACAGGAGGGTAGAGTGAA-GCG--GGT 964815 Query 112262 GC-CA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 | || ||| | |||||| | || || | ||||||| || || || || ||||| Sbjct 964814 GGTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACAGAAACGGGAACACC 964755 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 || ||| | |||||||| ||||||||| |||||||| || |||||||||| || Sbjct 964754 TTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCAT 964695 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 ||| | ||| | || || || || |||| | |||| ||||||||| || || Sbjct 964694 CAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTAGCCGT 964635 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 112498 |||||| | || ||||| |||||| || |||||| |||||| | || ||||| Sbjct 964634 CTGTAACTTGGCCTCAATTGCTCTCAACATGTATGTTACTCCAGA---ACGCACCTTTGA 964578 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAA---ACTGTCACAAAAAACCTAAACAGAGTTAT 112555 || |||| || | ||| || ||| | ||| || ||| || || | | || Sbjct 964577 TTTCAAAAAGCTTGCCTCAGTCACTAAAGTAATTGT---AAGAAATCTCAATAAGATCAT 964521 Query 112556 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615 ||| | || | ||||| ||| || || || || | | | ||| | ||||| Sbjct 964520 TGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCCACAGGCCAAT 964461 Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA--- 112672 ||| ||||||| || ||||| || |||| ||||| || || | ||||||| Sbjct 964460 TGGGATCGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGAAAG 964401 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 ||| || ||| || | ||| | || ||||| || || || | || || || Sbjct 964400 TTCTGA---AGCCCAGCTGCTGAATATCCAGATCTTTGAAACCATCTACTATGCTGCCCT 964344 Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 ||||| || | ||||||||||| || || || ||||| || | || || || Sbjct 964343 GGAGGCAAGCTGCGAGTTGGCAGAAAAGGACGGGCCTTATGAGACATACCCAGGCTCCCC 964284 Query 112793 AGCTTCACAAGGGG--TGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGCTTCAC 112847 || | | ||||| | || |||| || ||||||||| | | ||| |||| | Sbjct 964283 AG--TGAGTAGGGGCATTCTGCAATACGACATGTGGGAAAAGGTGCCCACTGAGCT---C 964229 Query 112848 TACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906 | |||||| | ||| || ||||| || | | ||| | | ||||| || || Sbjct 964228 TGGGACTGGAA-GCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGGAACAGCCTGTT 964170 Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966 | |||| || ||||| ||||||||||| || ||||| | || || ||||| | | | || Sbjct 964169 GTTGGCCCCTATGCCCACAGCCTCCACAGCGCAAATACTTGGCAACAATGAGTCCATCGA 964110 Query 112967 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026 | ||||||| | |||||||| | ||| ||| | ||||||||| |||||| || Sbjct 964109 AGCCTACACCAGCAACATCTACACACGCAGAGTCCTGTCTGGAGAGTTTCAGATTGTAAA 964050 Query 113027 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 113084 | ||||| || | ||||| | || || || ||| | |||| |||||| || Sbjct 964049 CCCACATCTGCTGAAGGACCTAACTGAACGGGGGCTGTGGAACGAGGAGATGAAGAAT 963992 >seq20084 Length=15297 Score = 95.1 bits (104), Expect = 2e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251 || ||||| ||| ||||| |||||||||||||| || ||| ||| |||| ||||| Sbjct 12821 GCCTTTGCTGCTGTGGAGGGGATCTTCTTCTCTGGATCGTTCGCCGCCATTTTCTGGCTG 12762 Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311 ||||| ||||| || ||||| || || ||||||||||| |||||| || |||||| Sbjct 12761 AAGAAACGAGGCCTGATGCCCGGACTGACTTTCTCCAACGAACTTATCAGCCGCGACGAG 12702 Query 102312 GGACT 102316 | ||| Sbjct 12701 GTACT 12697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620540193163200