Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 233 2e-56
seq22773 109 6e-19
seq19222 86.0 7e-12
>seq18889
Length=1054283
Score = 233 bits (258), Expect = 2e-56
Identities = 935/1442 (65%), Gaps = 50/1442 (3%)
Strand=Plus/Plus
Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946
||||| ||| |||||| ||||||||| | ||| ||| | |||||||| |
Sbjct 964041 AGATGTGGGTTTACAATCTGAAACTCTCCAGACAGGACTCTGCGTGTGTAGATGTTGCTG 964100
Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006
||||||| ||| | | | ||||| || || | ||||| || ||||||||||| |||||
Sbjct 964101 GTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATA 964160
Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066
|| |||| ||| || ||||| | | ||| | || || ||||| || | | |
Sbjct 964161 GGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTC 964220
Query 106067 CAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCACATATCAAATTGAAGCA--CCCCTT 106121
||||| || |||| || |||||| ||||||| || |||| || | |||||
Sbjct 964221 CAGTCCCAG---AGCTCAGTGGGCACCTTTTCCCACATGTCGTATTGCAGAATGCCCCTA 964277
Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181
|| ||||| || |||||||||| | || | ||| ||||| || ||||
Sbjct 964278 CTCACTGGGGAG--CCTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCCAACTCGCAGC 964335
Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241
| |||||||||| || | || |||||||||||||| | ||||| | || |||||
Sbjct 964336 TTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTT 964395
Query 106242 CATCTGAA---TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 106298
|| ||| ||||||| || || | || || |||| || ||||| || ||||
Sbjct 964396 CA---GAACTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACAC 964452
Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAA 106355
| | ||||| || ||||| ||| | || || || | | | ||| || || ||
Sbjct 964453 CGATCCCAATTGGCCTGTGGCGCTTGTTTGAATT---CTCTGCTTCAGGAACTGGGTAGT 964509
Query 106356 AATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTT-GTGATTTCATGAA 106412
| || ||||||||| || |||||| | ||||| |||| |||| | ||
Sbjct 964510 AGTTAATGTCAATGATCTTATTGAGATTTCTT---ACAATTACTTTAGTGACTGAGGCAA 964566
Query 106413 GTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATG 106472
| |||| ||||||| ||||| ||| | | |||||| | || || ||||| |
Sbjct 964567 GCTTTTTGAAATCAAAGGTGCGT---TCTGGAGTAACATACATGTTGAGAGCAATTGAGG 964623
Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532
|||| || || || || ||||| || ||| ||||| | ||| || || |||||||
Sbjct 964624 CCAAGTTACAGACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGT 964683
Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592
| | || || || |||||||||| ||||||||||| |||| || ||||| ||||
Sbjct 964684 TACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGT 964743
Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CG 106651
| | |||||| || || ||||| || ||||| |||| | || || | |||||| | |
Sbjct 964744 ACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATACCACACCTGCT 964803
Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711
| | || | || || || | | |||||| || || |||||| || |||
Sbjct 964804 GAGCCTTGACCACCCGC-TTCACTCTACCCTCCTGTTCATATCGTGTGTACAGCTTCTCA 964862
Query 106712 AACTCCT-CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACC 106769
||||||| | |||| | | || | ||| | || | || ||||| | | |||||
Sbjct 964863 AACTCCTCCCCCCAACAC-TCATCCA-ACCCAGGGCACTCACTGGGACACATCAAAGACC 964920
Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829
| | | || || | ||||||||| ||||| || ||||| |||| | ||||
Sbjct 964921 AGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAGAAGA 964980
Query 106830 GATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATG 106888
| |||| || ||| || | ||| ||| || | | |||||| || || |
Sbjct 964981 GGTCTCGCGCCCTCTGCTCCTCTTTACCAGTGTT-CTTCTTCAGCTCAAGAAAGTCAAAC 965039
Query 106889 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCT 106945
| ||| |||||||||||| | || | || | | ||| ||| | ||| ||
Sbjct 965040 ACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTATTGCCACCT 965099
Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005
|| | |||||||| || ||| ||| | || | ||||| || | || ||||| |||
Sbjct 965100 TGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCGGCACAAGACCATTTGAG 965159
Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTG--GCTCTCACATCATGGATGTGC-ATC 107062
| ||||||||| || ||| | | || || | ||| | | || | ||| |
Sbjct 965160 TTACCATTTGTTCCAGCAAT--GTAACTTCCTGTTGATCTAATA-CAGCTAACTGCTACA 965216
Query 107063 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 107122
||||| || || || | || ||||| | ||||| | | || || |||| || ||
Sbjct 965217 CCAATCCCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTGTGTCATAAATGCCA 965276
Query 107123 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 107182
| || ||| ||||| |||| | |||||||| ||||| | ||| ||||| ||
Sbjct 965277 TCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTGTTAGTG 965336
Query 107183 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTA 107241
|| || ||||| || || || | || ||| ||||| || | | |||| | || |||
Sbjct 965337 CCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAAC-CACTTCTCAGACAGCAGGTTGTA 965395
Query 107242 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301
||||| | | | | ||| || || |||||| |||| || || | ||| | |||
Sbjct 965396 GGTCTCAATGGCTGCATCTATATCAGAGTTGTGGATTCCGACAGCTACTCTCATGAGCAT 965455
Query 107302 GT 107303
||
Sbjct 965456 GT 965457
>seq22773
Length=730387
Score = 109 bits (120), Expect = 6e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
|||||| || |||||| |||| ||| || || |||| |||| ||| || || ||
Sbjct 300283 CTCATCTTTGCTTGTGTATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCC 300342
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
| ||||| ||||| ||||| | ||||| ||||| |||||||||||||| || || ||
Sbjct 300343 TAGATTCTGCTGGTTGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACC 300402
Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646
|||||| |||||||||| | ||| || | |||||
Sbjct 300403 CGTCTCTGTCTGTGACTCAATAATGGCATACCACA 300437
Score = 86.0 bits (94), Expect = 7e-12
Identities = 142/204 (70%), Gaps = 6/204 (3%)
Strand=Plus/Plus
Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACC---TTGGGCTTCAGCCAATTCACAGCTCGCC 106186
||||| || || |||| ||||| | || |||||| ||| | ||||||||| |||
Sbjct 299780 GGAGAGCCAGCATATGTTTCATAAGGTCCATCTTGGGC---AGCTAGTTCACAGCTGGCC 299836
Query 106187 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 106246
|||| | || | ||| ||||| ||||| || | || | | || ||| || ||
Sbjct 299837 TCCAAAGCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATACTGGGCCTCTTCA 299896
Query 106247 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306
||||||| || || | ||| || | ||||| ||||| |||||||| | |||
Sbjct 299897 CTTTCAAATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCGATCCCA 299956
Query 106307 ATAGGTCTGTGTCGCATATTAGAC 106330
||||||||||| ||||| ||||||
Sbjct 299957 ATAGGTCTGTGGCGCATGTTAGAC 299980
>seq19222
Length=928746
Score = 86.0 bits (94), Expect = 7e-12
Identities = 96/123 (78%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTG-AGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351
||||||||| | ||||||||||| | | ||| | ||||| ||||| ||||||| |||
Sbjct 773895 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTA-AGGCCAGGCATTAGACCCCTCTTT 773837
Query 117352 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410
|||| ||||||||| || ||| || || || |||||||| || ||||| ||| |||||
Sbjct 773836 TTCAGCCAATAAATGGCAGCA-AAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAA 773778
Query 117411 CGC 117413
||
Sbjct 773777 TGC 773775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589788613754400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |