Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015279.1
Length=190789
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 616 2e-171
seq25415 558 4e-154
>seq21827
Length=6214
Score = 616 bits (682), Expect = 2e-171
Identities = 738/997 (74%), Gaps = 4/997 (0%)
Strand=Plus/Plus
Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798
|||| | |||||| | ||| ||||| || | ||||| || || | || |||||
Sbjct 5022 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 5081
Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCAT 179857
|| ||| ||||||| || || | ||| | |||||| |||| || || |||| |||||
Sbjct 5082 GGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCAT 5140
Query 179858 CGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 179917
||||| || || || || || ||||| || |||||||| || |||| || || | ||
Sbjct 5141 TGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTA 5200
Query 179918 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 179977
||| ||||| || || |||||||| || ||||| |||| || || ||| | || ||
Sbjct 5201 TGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTT 5260
Query 179978 CTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCA 180037
|| || || |||||||| || || |||| || ||| | || || |||||||||| |
Sbjct 5261 TTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 5320
Query 180038 ACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACT 180097
|| | || | ||||| | |||| | | || ||||||||||||||||||||
Sbjct 5321 GCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACT 5380
Query 180098 TTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTG 180156
| || || ||||||||||||| ||||| ||| || |||||||| ||||| || || |
Sbjct 5381 TAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAG 5439
Query 180157 CAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGC 180216
| || ||||||| ||| | ||||||| | |||||||| || ||||||| ||||
Sbjct 5440 CTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGC 5499
Query 180217 CCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCC 180276
| || || || ||||| || ||||||| |||| |||| |||||||| |||||||||||||
Sbjct 5500 CTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCC 5559
Query 180277 TGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCG 180336
| |||||||| || |||||| | || ||||| ||||| |||||||| || || ||| |
Sbjct 5560 TTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 5619
Query 180337 CAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCC 180396
| ||||| ||||| |||| || ||| || | | |||||||| |||| ||| ||
Sbjct 5620 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 5679
Query 180397 AGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATG 180456
|| | ||||||| || |||||||| ||||| |||||||| ||||| ||||| ||||
Sbjct 5680 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATG 5739
Query 180457 GATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACT 180516
| || || || || |||||||||| ||||| ||||||||||| ||||| | ||||
Sbjct 5740 GTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACT 5799
Query 180517 TCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCA 180576
||||||| || || |||||||| || || || ||||||||||| | || | ||||| |
Sbjct 5800 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTA 5859
Query 180577 TGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTG 180636
|||| || ||| | || |||||||| |||||||| || | ||||| ||||||||||||
Sbjct 5860 TGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTG 5919
Query 180637 TGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACG 180696
| | || || ||||| || | ||||||| ||| ||||||||||||||||||| |
Sbjct 5920 TAATTAATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATG 5979
Query 180697 AGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGC 180733
| ||||| ||||| |||||||| || || || || ||
Sbjct 5980 AACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 558 bits (618), Expect = 4e-154
Identities = 736/1015 (73%), Gaps = 4/1015 (0%)
Strand=Plus/Plus
Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483
||||| || | ||||||||| | | ||||| || || ||||| || ||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543
||| | || ||||| ||| ||| | || | ||||| ||| | || || || || |||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGG-TGCTAATTTCCT 181602
|| || || ||||| ||||| ||||| || |||||| | || || ||| || ||| |
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTT 544
Query 181603 TACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 181662
|| || || || || || |||||| | | | | || ||| | | |||| |||||
Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGG 604
Query 181663 TCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGT 181722
|||||||| || || ||||| || ||| ||| | || || || ||| |||||||
Sbjct 605 CCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 664
Query 181723 GGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG 181782
|| || ||||| || |||| || || ||||| ||| | | |||||||||||||||||
Sbjct 665 TGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 724
Query 181783 -TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCG 181841
||| || | | ||||| || ||||| || || || |||||||| ||||| || || |
Sbjct 725 ATCTGTTCA-ATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTG 783
Query 181842 TCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCG 181901
| |||||||| || || ||||| || || || || |||||||||||||||| ||||| |
Sbjct 784 TTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTG 843
Query 181902 GTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCA 181961
|||| ||||| || || || ||| | ||||| |||| || |||||||||||||| | |
Sbjct 844 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 903
Query 181962 ATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTC 182021
| || || ||||||||||| |||||||| | |||| | || | || | || ||||
Sbjct 904 ACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTC 963
Query 182022 ACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAG 182081
| |||| ||||| || |||||| | | | |||| ||||| |||||||| ||| |
Sbjct 964 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGG 1023
Query 182082 CATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGT 182141
| || | ||||||||| |||||||| ||||||||||| || || |||||||| ||||
Sbjct 1024 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 1083
Query 182142 CTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTG 182201
| || ||||| || |||| ||| |||||| | ||||| |||||||||||| | ||||
Sbjct 1084 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 1143
Query 182202 TTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 182261
| || || | ||| | |||| ||| | | || | | ||||| || || || || |
Sbjct 1144 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTAC 1203
Query 182262 GTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGT 182321
|||| |||||||| || || || |||||| | ||| | ||||| || || || ||||| |
Sbjct 1204 GTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTT 1263
Query 182322 TCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATC 182381
||||||| || || |||||||| || |||||| | ||||| ||| | || | ||||
Sbjct 1264 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 1323
Query 182382 AACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436
| || ||||| ||| || | ||||||||||| || ||||| | || ||||| ||
Sbjct 1324 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610197963242400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |