Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 518 4e-142
seq25415 381 7e-101
>seq21827
Length=6214
Score = 518 bits (574), Expect = 4e-142
Identities = 683/944 (72%), Gaps = 2/944 (0%)
Strand=Plus/Plus
Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500
|||| |||||||||||| | ||||| || |||| | || ||| | | ||| || ||
Sbjct 5071 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATT 5129
Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560
| || |||||||| || ||||| || ||||| || || || | ||||| || | ||
Sbjct 5130 ATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 5189
Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620
||| | | ||||| ||||| || || |||||||| || |||| | || || ||
Sbjct 5190 TCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATA 5249
Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680
|| | || || ||||| || |||||||| || | |||||||||||||| || ||||||
Sbjct 5250 GGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGT 5309
Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740
||||||||| || | | | | ||||| | ||||| | | || ||||| |
Sbjct 5310 GGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGT 5369
Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800
|||||||||| | | | | || ||||| |||||||| ||||||||| || ||
Sbjct 5370 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCT 5429
Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860
|| || | ||||| ||||| ||||| | || ||| ||||||| || || |||
Sbjct 5430 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCT 5489
Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920
|| |||||||| ||||| ||||| |||||||||||||| ||| | || |||||||| |||
Sbjct 5490 GACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAG 5549
Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980
|| ||||| || ||||| || || |||||| ||| ||||| || | ||||| || ||
Sbjct 5550 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCC 5609
Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040
||||| || ||||||||||| | || ||||| | | ||||| ||||| |||||
Sbjct 5610 CTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 5669
Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100
| || || || | ||||| | ||||| ||||| |||||||| ||||| || |||
Sbjct 5670 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTA 5729
Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160
|| || || ||||| ||||| || | |||||||| |||||| ||||||||||| |
Sbjct 5730 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGT 5789
Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220
| |||||||||||||||| | || ||||| ||| || | ||||| || || | |||
Sbjct 5790 TCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGT 5849
Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280
|| |||| ||||| || ||||| ||||||||||| || |||||||| || |||||| |
Sbjct 5850 ATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGT 5909
Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340
| || | | || |||| |||| || | ||| | || |||||||||||||||
Sbjct 5910 CAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAA 5969
Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 170384
|||||||||||| | || || || |||||||| ||||| |||||
Sbjct 5970 GTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGC 6013
>seq25415
Length=1491
Score = 381 bits (422), Expect = 7e-101
Identities = 710/1043 (68%), Gaps = 31/1043 (3%)
Strand=Plus/Plus
Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588
|||||| || | || ||||||||| ||| || ||||| || || |||| ||||| |||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648
|| || || | |||||||| || | | | || |||||||| ||| || |||||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708
|| || ||||||||||| ||||| | || || ||| | || || || |||||| ||
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAACTTCTTA 545
Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 170763
|| || |||||||| || |||| ||| | | || | |||| |||| || |
Sbjct 546 ACCGCCGCAGTTTCTACTCCTG-----CTAATAGTTTAGCACACTCTTTGTTGTTACTAT 600
Query 170764 GGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACT 170823
|||| |||||||||||||| ||| |||||||| ||| | || ||| | |||| |
Sbjct 601 GGGGCCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTT 660
Query 170824 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCG 170883
|||| || | || || | || ||||| |||||||||||| | | |||||||| | |
Sbjct 661 TTGTTGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTG 720
Query 170884 CAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCT 170943
| || ||| | ||||||| || ||| |||||||||| | | || || || |
Sbjct 721 CTCGATCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTT 780
Query 170944 TCACTAGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCAT 171003
| | | || ||||| ||||| ||||||||| |||||||||| || ||| |
Sbjct 781 TTGTTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTT 840
Query 171004 TCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACAT 171063
| ||||| || || || ||||| | ||| | || | ||||| || || || ||||
Sbjct 841 TTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACAT 900
Query 171064 TGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCA 171123
|||| |||||||| |||||||| ||||| || || | || | || | |||| || |
Sbjct 901 TGAACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTA 960
Query 171124 TTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATA 171183
|||||||||| || || | || || || | ||||| || ||||
Sbjct 961 TTCATGGTGCTACCGTAGAAAATACTTTATTTGAAG------------ATGGTGAT---- 1004
Query 171184 AAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTA 171243
| |||| |||||||| || ||| | || || || | ||||||||||| |
Sbjct 1005 -GGTGCAAA----TACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAA 1059
Query 171244 TGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGAT 171303
|| | || || ||| | || ||||| || || ||||| ||||||| || || ||| | |
Sbjct 1060 TGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTT 1119
Query 171304 TTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTA 171363
||||| ||| ||||||| || || || || | ||| | |||| || | ||
Sbjct 1120 GGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAG 1179
Query 171364 TCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAG 171423
| || |||||||| || || || | || || || || || ||||| || || | ||||
Sbjct 1180 TAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAG 1239
Query 171424 CAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGA 171483
| ||||| || || || |||||||||||||| || ||||| || | || ||||||||
Sbjct 1240 CGGAAGATCCGGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTC 1299
Query 171484 GAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGT 171543
| || |||||| | | || || || ||||| ||| | ||||||| || || ||
Sbjct 1300 GTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTC 1359
Query 171544 TACCAAGAGGTAACGCACTTTAA 171566
|||| | || ||||| ||||||
Sbjct 1360 TACCCCGTGGAAACGCTCTTTAA 1382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579024121430400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |