Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015281.1
Length=179563
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 587 9e-163
seq25415 544 9e-150
>seq21827
Length=6214
Score = 587 bits (650), Expect = 9e-163
Identities = 724/987 (73%), Gaps = 2/987 (0%)
Strand=Plus/Plus
Query 167863 TTCTGCGAGTGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 167922
||||| | ||| |||| ||| | ||||| || || | || ||||| || || ||
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 167923 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 167981
||||| || || | ||| | |||||| ||||| || || |||| ||| | ||||| ||
Sbjct 5091 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 5149
Query 167982 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 168041
|| || || || || || || |||||||| || |||| || || | ||||| |||||
Sbjct 5150 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 5209
Query 168042 CATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCAT 168101
|| || |||||||| || | ||| ||||| || || || | || || || || ||
Sbjct 5210 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGAT 5269
Query 168102 CTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGT 168161
|||||||| || || | ||||| ||||| || || |||||||||| | ||| | ||
Sbjct 5270 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 5329
Query 168162 CTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCG 168221
| ||||| | | ||| | | || ||||| ||||| ||||||||| | ||
Sbjct 5330 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 5389
Query 168222 TTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGC 168281
| | |||||||| || ||||| ||||||||| || || || || || || || | |||
Sbjct 5390 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 5449
Query 168282 AGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 168341
|| ||| | | ||||| | |||||||| || || ||||| | ||||| || |||||
Sbjct 5450 TGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 5509
Query 168342 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 168401
||| || || ||||||| |||| | || ||||||||||||||||| || || ||||| ||
Sbjct 5510 CTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 5569
Query 168402 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 168461
|| || ||| | ||||| ||||| ||||| || ||| | || ||||||||||| ||
Sbjct 5570 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 5629
Query 168462 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 168521
||||| |||||| | | | || || || || |||| ||||| || | ||
Sbjct 5630 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 5689
Query 168522 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 168581
||||| ||||| ||||| |||||||| ||||| |||||||| ||||||||||| || ||
Sbjct 5690 TTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGG 5749
Query 168582 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 168641
|| |||||||||||||| ||| ||||||||||| || || || ||||||||||| ||
Sbjct 5750 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGC 5809
Query 168642 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 168701
||| |||||||| || || || |||||||| || | || | ||| ||||| || ||
Sbjct 5810 TGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAA 5869
Query 168702 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 168761
| | || |||||||| |||||||| || | ||||| |||| |||||||| | || ||
Sbjct 5870 CTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5929
Query 168762 CTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 168821
|||||| ||| || | ||||| ||| |||||||||||||||||||||| ||||||||
Sbjct 5930 CTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACGC 5989
Query 168822 ACACAACTTCCCACTCGATCTTGCTGC 168848
|| |||||||| || ||||| |||||
Sbjct 5990 TCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 544 bits (602), Expect = 9e-150
Identities = 731/1016 (72%), Gaps = 6/1016 (1%)
Strand=Plus/Plus
Query 169307 TTCGATGTTCTCGATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGGTCTGGT 169366
|| ||| || | ||||||||| | | ||||| || || || | |||||||| |||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 169367 CTACTTCTTCTTCCCACTGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTACAGCGTTT 169426
||| | || |||| ||||||| | || | || || ||| | || |||||| | |||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 169427 GTTACTTCCTGGTACACCCACGGACTCGC---TTCCAGTTACTTAGAAGGCGCTAACTTC 169483
|| ||||| ||||| ||||| ||| | || |||| || || |||||| ||||||
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCC---TATTTGGAAGGCTGCAACTTC 542
Query 169484 CTCACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTGCTATGG 169543
| || || || || ||| |||||| | | | | |||||| || | || ||||||
Sbjct 543 TTAACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGG 602
Query 169544 GGTCCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGGAACTTT 169603
|| || ||||||||||| ||||| ||| ||||||||||| || ||||| |||| |||
Sbjct 603 GGCCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTT 662
Query 169604 GTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAATTGGCA 169663
|| || ||||| || || || | | | || ||||||||| | | || |||||| | ||
Sbjct 663 GTTGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCT 722
Query 169664 CGTCTTATTGGCATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCTGTATTT 169723
|| | || | || ||||||||||| || |||||||| ||||| ||||| || |||
Sbjct 723 CGATCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTT 782
Query 169724 GTCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTT 169783
|| ||| || || || || || || || ||||| ||||||||||| || |||
Sbjct 783 GTTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTT 842
Query 169784 GGAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTG 169843
|| ||| | || || || | ||| | | || | ||||| || || || ||||| |||
Sbjct 843 GGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTG 902
Query 169844 AATCCATTCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATC 169903
|| ||||| || |||||||| || || || | ||||||| || |||| | |||||
Sbjct 903 AACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATT 962
Query 169904 CATGGTGTTACAGTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAG 169963
||||||| ||| ||||| || || || | |||||| ||||| |||||||| ||| |
Sbjct 963 CATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGG 1022
Query 169964 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 170023
|| ||| | | || || | ||||| |||||||| |||||||| || |||||||| |||
Sbjct 1023 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 1082
Query 170024 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTT 170083
|| || ||||| || |||| ||||| || || |||||| | ||||| || ||||| |||
Sbjct 1083 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 1142
Query 170084 GTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT 170143
|| || || | ||| | |||| || |||| | | || || || || |||||
Sbjct 1143 GTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTA 1202
Query 170144 CGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACC 170203
||||| || || ||||| |||||| ||| | ||||| |||||||| |||||||||||
Sbjct 1203 CGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACT 1262
Query 170204 TTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGAT 170263
|||||||||||||| || || || || ||||| ||||||| ||| |||| || |||
Sbjct 1263 TTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 1322
Query 170264 CAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319
|| || ||||||||| | || ||||| || || ||||| || | || ||||| ||
Sbjct 1323 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 574286465224800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |