Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015282.1
Length=174079
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 682 0.0
seq25415 569 2e-157
>seq21827
Length=6214
Score = 682 bits (756), Expect = 0.0
Identities = 731/961 (76%), Gaps = 4/961 (0%)
Strand=Plus/Plus
Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTG-CAGCAAC 163870
||||| || || |||| ||||| || ||| ||||||||||||| || ||| | |||||
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTAC-CTTATTGACCGCAAC 5116
Query 163871 CATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTG 163929
||||| || || |||| ||| | ||||| || || || || || |||||||||||||
Sbjct 5117 T-TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTG 5175
Query 163930 AACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCT 163989
|||||||| | || || || | ||||| ||||| || || |||||||| || ||||
Sbjct 5176 AACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTA 5235
Query 163990 CGTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAAT 164049
| || || || ||| | || || ||||| || |||||||| || ||| |||||||||
Sbjct 5236 CTTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAAT 5295
Query 164050 GGCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTATCTATG 164109
|| | ||||| |||||||||| | || | || | ||||| | | ||| | |
Sbjct 5296 GGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTT 5355
Query 164110 CATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTG 164169
|| |||||||||||||||||||| || |||||| |||||||| ||||||||| ||
Sbjct 5356 GTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTG 5415
Query 164170 TTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTC 164229
|||| || || || || |||||||| || | || || ||| || ||||||| | ||||
Sbjct 5416 TTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTC 5475
Query 164230 AAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGG 164289
|||| || ||||||| ||||| || || |||||||| || ||||||| |||| | |
Sbjct 5476 AAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTG 5535
Query 164290 TGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCG 164349
| |||||||| |||||||||||||| |||||||| || || ||| | ||||| ||||| |
Sbjct 5536 TATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTG 5595
Query 164350 TATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTC 164409
|||| ||||| || || |||||||| ||||| ||||| |||| |||||| || |
Sbjct 5596 TATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCA 5655
Query 164410 GTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAA 164469
| |||||||| |||| ||| || || | ||||||| || |||||||| |||||||
Sbjct 5656 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 5715
Query 164470 CATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCAT 164529
| ||||| || || || ||||| ||||| ||||| || ||||||||||||| ||| |
Sbjct 5716 CCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 5775
Query 164530 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGT 164589
|||||||||| ||||| || ||||||||||| ||||| |||||||| || || || ||||
Sbjct 5776 TCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGT 5835
Query 164590 TCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 164649
|||| || | ||| || ||| ||||| || ||| | || |||||||| |||||||| |
Sbjct 5836 TCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAAT 5895
Query 164650 CCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTG 164709
| | | ||| |||| |||||||| | || || ||||| || || ||||||| |||
Sbjct 5896 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTA 5955
Query 164710 GTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTG 164769
||||||||||||||||||| || ||||||||||| ||||||||||| ||||| ||||
Sbjct 5956 ACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTG 6015
Query 164770 c 164770
|
Sbjct 6016 C 6016
>seq25415
Length=1491
Score = 569 bits (630), Expect = 2e-157
Identities = 731/1003 (73%), Gaps = 4/1003 (0%)
Strand=Plus/Plus
Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265
||||||||| | | || |||||||||||||| |||||||| || || | || |||
Sbjct 378 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 437
Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325
|| ||| ||| | || | || |||||| |||| || || || || | || |||
Sbjct 438 CCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGG 497
Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGT 165384
||||| || || || |||||||||||| |||| || ||||| ||| | || || |||||
Sbjct 498 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCCGCAGT 556
Query 165385 TTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCA 165444
||||||||| || | | | | || ||| | || | || ||||| ||||| || ||
Sbjct 557 TTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCACA 616
Query 165445 AGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGG 165504
||| ||||| | ||| ||| | || || || ||| ||||||| || || |||||
Sbjct 617 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGG 676
Query 165505 GGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGTA 165563
||||||| ||||| ||||||||| | ||||| |||||| | || || ||| || |
Sbjct 677 CGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT- 735
Query 165564 TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTC 165623
| || || || ||||| || || ||||| ||||| || || ||||||||| || || |
Sbjct 736 TACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCC 795
Query 165624 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAA 165683
| || || || || ||||| || ||||||| || || ||| ||| || || || || |
Sbjct 796 TGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTA 855
Query 165684 TCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATA 165743
| || | ||| | ||||| | ||||| || ||||| ||||| ||||| || |||||||
Sbjct 856 TATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATA 915
Query 165744 TGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAG 165803
||||||| ||||| || | |||| | ||| |||| | || || ||||||| ||| |
Sbjct 916 TGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCG 975
Query 165804 TAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTA 165863
|||| |||||| | | | |||||||||| | ||||||||| ||| ||| ||| || | |
Sbjct 976 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAA 1035
Query 165864 CTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCG 165923
|||||| |||||||| || |||||||| || || ||||| || ||||| || ||||| |
Sbjct 1036 CTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTG 1095
Query 165924 GTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGG 165983
| |||| ||| ||||| | ||||| |||||||||||| | ||||| || || | |
Sbjct 1096 GGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCG 1155
Query 165984 GTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACT 166043
|| | |||| ||| | | || | | ||||| || || || || ||||| |||||||
Sbjct 1156 GTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACT 1215
Query 166044 TTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAA 166103
| || || || || ||| | ||||| ||||| || || ||||| || |||||||| ||||
Sbjct 1216 TCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAAAA 1275
Query 166104 ACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAGA 166163
| |||||||| || |||||| ||||||||||| |||| | ||||| || ||||| |
Sbjct 1276 ATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAA 1335
Query 166164 ACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206
|| || | |||||||| || ||||| || | || ||||| ||
Sbjct 1336 ACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556743381746400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |