Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 495 4e-135
seq25415 358 8e-94
>seq21827
Length=6214
Score = 495 bits (548), Expect = 4e-135
Identities = 700/984 (71%), Gaps = 0/984 (0%)
Strand=Plus/Plus
Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879
||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| |
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939
|||||||| || | || ||| | | || || | || |||||||| || |||
Sbjct 5091 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCT 5150
Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999
|| || ||||| || || || | ||||| ||| | || ||| | | ||||| |||||
Sbjct 5151 CCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 5210
Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059
|| || |||||||| || |||| | || || |||||| | || || ||||| ||
Sbjct 5211 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGATA 5270
Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119
|||||||| || |||| ||||||||||| |||||||||||||||||| || | | |
Sbjct 5271 TGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 5330
Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179
| ||||| | | ||| | | || ||||| | |||||||||| | | |
Sbjct 5331 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 5390
Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239
| |||||| | || ||||| ||| ||||||||||| ||||| |||| || ||||
Sbjct 5391 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 5450
Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299
|| ||| | | |||||| | ||||| || || ||||| |||||||| ||||| |||
Sbjct 5451 GTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATC 5510
Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359
|| ||||| |||||||| ||| | || |||||||| ||||| ||||| || ||||| ||
Sbjct 5511 TCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 5570
Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419
|| |||||| ||| ||||| || | || || || || ||||| || ||||| |||
Sbjct 5571 TTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 5630
Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479
|| || || || ||| | | ||||| || || || ||| ||||| || | ||
Sbjct 5631 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 5690
Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539
|||| ||||| ||||| |||||||| ||||| || ||||| || || ||||| |||||
Sbjct 5691 TACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGGC 5750
Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599
|| | |||||||| |||||| |||||||||||| | | | ||||||||||||||
Sbjct 5751 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCT 5810
Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659
| || ||||| ||| || | ||||| || || | ||||| | || ||||| || |||
Sbjct 5811 GCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAAC 5870
Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719
| || |||||||| ||||||||||| || || ||| | | ||| | || |||
Sbjct 5871 TTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 5930
Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779
|||| ||| || | ||| | || ||| | ||||||||||||||||||||| | || ||
Sbjct 5931 TGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACGCT 5990
Query 172780 CACAACTTCCCATTAGACCTTGCT 172803
|| |||||||| |||| || |||
Sbjct 5991 CATAACTTCCCTCTAGATCTAGCT 6014
>seq25415
Length=1491
Score = 358 bits (396), Expect = 8e-94
Identities = 704/1043 (67%), Gaps = 31/1043 (3%)
Strand=Plus/Plus
Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010
|||||| || | || ||||||||| ||| || |||||||| || | || ||||| |||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070
|| || || | |||||||| || | | | || |||||||| ||| || |||||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130
|| || ||||||||||| ||||| | ||| ||| ||| | ||||| ||||| |||
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAACTTCTTA 545
Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 173185
|| || ||||| || || |||| ||| | | || | |||| |||| || |
Sbjct 546 ACCGCCGCAGTTTCTACTCCTG-----CTAATAGTTTAGCACACTCTTTGTTGTTACTAT 600
Query 173186 GGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACT 173245
|||| |||||||||||||| || ||||||| ||| | || || || |||| |
Sbjct 601 GGGGCCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTT 660
Query 173246 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCG 173305
|||| || | || || | || ||||| |||||||||||| | ||||| ||||| | |
Sbjct 661 TTGTTGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTG 720
Query 173306 CAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCT 173365
| || ||| | ||||||| || ||| |||||||||| | | || || || |
Sbjct 721 CTCGATCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTT 780
Query 173366 TCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCAT 173425
| | | || | || || || ||||| ||| |||||||||| || || |
Sbjct 781 TTGTTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTT 840
Query 173426 TCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACAT 173485
| ||||| || || || ||||| | ||| | || | ||||| || || || ||||
Sbjct 841 TTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACAT 900
Query 173486 TGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCA 173545
|||| |||||||| |||||||| ||||| || || | || | || | ||||| || |
Sbjct 901 TGAACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTA 960
Query 173546 TTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTA 173605
|||||||||| || || | || || || | ||||| || ||| |||
Sbjct 961 TTCATGGTGCTACCGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT- 1007
Query 173606 AGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTA 173665
| | || ||| | || ||| | || || || | |||||||||||| |
Sbjct 1008 --------GCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAA 1059
Query 173666 TGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGAT 173725
|| | || || ||| | || ||||| || || ||||| | || ||||| || ||| | |
Sbjct 1060 TGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTT 1119
Query 173726 TTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTA 173785
||||| ||| | ||||| || ||||| || | ||| | |||| | | ||
Sbjct 1120 GGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAG 1179
Query 173786 TCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAG 173845
| || ||||| || || || || | || || ||||| || ||||| || || | ||||
Sbjct 1180 TAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAG 1239
Query 173846 CAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGA 173905
| |||||||| || || |||||||||||||| || ||||| || | || ||||||||
Sbjct 1240 CGGAAGATCCGGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTC 1299
Query 173906 GAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGT 173965
| || |||||| | || |||||| || ||||| ||| | |||| || || || ||
Sbjct 1300 GTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTC 1359
Query 173966 TACCAAGAGGTAACGCACTTTAA 173988
|||| | || ||||| ||||||
Sbjct 1360 TACCCCGTGGAAACGCTCTTTAA 1382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587859642321600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |