Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015285.1
Length=174285
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 576 2e-159
seq25415 506 2e-138
>seq21827
Length=6214
Score = 576 bits (638), Expect = 2e-159
Identities = 711/967 (74%), Gaps = 4/967 (0%)
Strand=Plus/Plus
Query 162412 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 162471
||||| || || | || ||||| || || ||||||| || || | ||| | |||||
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117
Query 162472 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 162530
||||| || || |||| ||| | ||||| || || || || || || || || |||||
Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176
Query 162531 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 162590
||| || |||| || || | ||||| ||||| || || |||||||| || |||| |
Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236
Query 162591 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 162650
||| || || ||| | || || || || || |||||||| || || ||||||| ||
Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296
Query 162651 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATCTATGC 162710
| | || || |||||||||| | || | || | ||||| | | || | |
Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356
Query 162711 CTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGC-G 162769
|| ||||| ||||| |||||||| || |||||| |||||||| || ||||| ||| |
Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTG 5415
Query 162770 TAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTC 162829
| ||||| || || ||||||||||| || | || || ||| || ||||||| | ||||
Sbjct 5416 TTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTC 5475
Query 162830 AAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTG 162889
|||| || ||||||| ||||| | || ||| |||||| ||||||| |||| |||
Sbjct 5476 AAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTG 5535
Query 162890 TCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTG 162949
| |||||||| ||||||||||| || ||||| || || |||||||| || || || ||||
Sbjct 5536 TATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTG 5595
Query 162950 TCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCC 163009
| ||||| || || || |||||||| ||||| ||||| ||||| || ||| | ||
Sbjct 5596 TATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCA 5655
Query 163010 GTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGA 163069
| || || || |||| ||| || || | ||||||| ||||||||||| ||||| |
Sbjct 5656 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 5715
Query 163070 CATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCAT 163129
| ||||| ||||| || || |||||||| || || || ||||||||||||||||| |
Sbjct 5716 CCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 5775
Query 163130 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 163189
|||||||||| ||||| || ||||||||||| ||||| |||||||| || || || ||||
Sbjct 5776 TCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGT 5835
Query 163190 TCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 163249
|||| || | || | || ||||| || ||| | || |||||||| |||||||| |
Sbjct 5836 TCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAAT 5895
Query 163250 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAG 163309
| | ||||| |||| |||||||| | || |||||||| || || | ||||||||
Sbjct 5896 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTA 5955
Query 163310 GTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGCAG 163369
|||||||||||||||||||| || || || ||||| |||||||| || || || || |
Sbjct 5956 ACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTG 6015
Query 163370 CTGCCGA 163376
| | |||
Sbjct 6016 CGGTCGA 6022
>seq25415
Length=1491
Score = 506 bits (560), Expect = 2e-138
Identities = 732/1023 (72%), Gaps = 10/1023 (1%)
Strand=Plus/Plus
Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680
|||||| | ||||||||||| | | | || |||||||| ||| | |||||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740
|| | || |||| ||| ||| | || | || || ||| |||| |||||||| ||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTG-AGGGTGCTAATTTTCT 163799
|| || || ||||| ||||||||| | |||| ||||||| | | ||| ||| || || |
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTT 544
Query 163800 CACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 163858
|| || || || || || |||||| | | | | || ||| || || || || ||||
Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCT-TTGTTGTTACTATGGG 603
Query 163859 GTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTG 163918
| ||||| || || || ||||| || ||| ||| | || || || |||| |||||
Sbjct 604 GCCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTG 663
Query 163919 TGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTC 163978
| || || ||||| || || | || || ||||||||| | || ||||||||||||||||
Sbjct 664 TTGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 723
Query 163979 G-CCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTC 164037
| ||| || | | |||| || ||||| || || ||||| ||||| ||||| || ||
Sbjct 724 GATCTG-TTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTT 782
Query 164038 GTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTT 164097
||| ||| || || || || || || ||||| || |||||||||| || ||| ||||
Sbjct 783 GTTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTT 842
Query 164098 GGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTG 164157
|| || || || || || ||||| || | || | ||||| |||||||| ||||| |||
Sbjct 843 GGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTG 902
Query 164158 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATT 164217
||||| || |||||||||||||||||||| || | |||| || |||||| ||||||
Sbjct 903 AACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATT 962
Query 164218 CACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAG 164277
|| || | || || |||||||| || | ||||||||| || ||||| || || |
Sbjct 963 CATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGG 1022
Query 164278 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 164337
|| ||| | | || || | ||||| |||||||| |||||||| || |||||||| |||
Sbjct 1023 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 1082
Query 164338 TCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 164397
|| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| |||
Sbjct 1083 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 1142
Query 164398 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT 164457
|| || || | ||| |||||| || |||| | | || || || || |||||
Sbjct 1143 GTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTA 1202
Query 164458 CGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACT 164517
||||| || || || || ||| || || | ||||| |||||||| || || ||||||
Sbjct 1203 CGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACT 1262
Query 164518 TTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGAC 164577
||||| ||||| || || | || |||||||| | ||||| ||| | || | ||
Sbjct 1263 TTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 1322
Query 164578 CAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTT 164635
|||| || || ||| || | ||||| || || || || || | || || || ||||
Sbjct 1323 CAGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTT 1380
Query 164636 AAT 164638
|||
Sbjct 1381 AAT 1383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557402367012000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |