Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 605 3e-168
seq25415 592 2e-164
>seq21827
Length=6214
Score = 605 bits (670), Expect = 3e-168
Identities = 717/978 (73%), Gaps = 2/978 (0%)
Strand=Plus/Plus
Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156
||| | ||||||||| | |||||||| || | || ||||| || ||| |||||||||||
Sbjct 5040 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 5099
Query 167157 ACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215
|| || | | ||||| ||||| || || ||||| ||| | | ||| ||||| || ||
Sbjct 5100 ACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGA 5158
Query 167216 CATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 167275
|| |||||||| || ||||| ||| |||| || || | ||||| ||||| || || ||
Sbjct 5159 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTC 5218
Query 167276 TGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGC 167335
|||||| || ||||| ||||| || || ||| | || || || || || ||||||||
Sbjct 5219 TGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGC 5278
Query 167336 AGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTT 167395
|| || | || || ||||| |||||||||||||||| | || | ||| | |||||
Sbjct 5279 GGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTT 5338
Query 167396 CCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 167455
| |||| | | ||||||||||||||||||||||| || |||||| |||||
Sbjct 5339 TTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 5398
Query 167456 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 167515
||| || ||||| ||||||||| || ||||| || || || || ||||||| ||| |
Sbjct 5399 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 5458
Query 167516 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTAC 167575
||||||| | |||||||| || ||||||| |||||||| || |||||||||||
Sbjct 5459 GATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTAC 5518
Query 167576 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 167635
||||||| |||| |||| |||||||| |||||||||||||| |||||||| || || ||
Sbjct 5519 TTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACAT 5578
Query 167636 GCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 167695
| | ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| ||||
Sbjct 5579 GTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 5638
Query 167696 TACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTT 167755
|| ||| || | | |||||||| |||| ||| || || | ||||||| ||
Sbjct 5639 AACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATT 5698
Query 167756 CGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGAT 167815
|||||| || ||||| || || || ||||| |||||||||||||| || || || ||||
Sbjct 5699 CGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGAT 5758
Query 167816 CTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCC 167875
||||||||| || ||||||||||| || || | ||||||||| | || || |||||
Sbjct 5759 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCC 5818
Query 167876 TGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGG 167935
||| || ||||| |||| || ||| | || ||
Sbjct 5819 TGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGG 5878
Query 167936 TTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGA 167995
|||||| |||||||| ||| | |||||||| ||| || | ||| ||||| ||
Sbjct 5879 TTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGA 5938
Query 167996 CGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTT 168055
| ||||||||||| ||||||||||||||||||| || ||||| ||||| |||||
Sbjct 5939 TATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTT 5998
Query 168056 CCCTCTCGACCTTGCTGC 168073
|||||| || || |||||
Sbjct 5999 CCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 592 bits (656), Expect = 2e-164
Identities = 734/1002 (73%), Gaps = 2/1002 (0%)
Strand=Plus/Plus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| |||||||||||||| |||||||| || || | || |||
Sbjct 378 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 437
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||| ||| | || | || |||||| |||| || || | || || || |||
Sbjct 438 CCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGG 497
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674
||||| || || || |||||||||||| |||| ||| ||||| | || || ||||||
Sbjct 498 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAACTTCTTAACCGCCGCAGTT 557
Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734
|||||| || || | | | || ||| | || | || ||||| ||||| ||||||
Sbjct 558 TCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCACAA 617
Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794
|| ||||| | ||||||||| | || || || ||| ||||||| || || |||||
Sbjct 618 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGGC 677
Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853
||||||| ||||| ||||||||| | ||||| |||||||| || || ||| || | |
Sbjct 678 GCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 736
Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913
|| || || ||||| || || ||||| ||||| || || ||||||||| || || ||
Sbjct 737 ACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCCT 796
Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973
|| || || || ||||| || ||||||| || || ||| ||| || || | || ||
Sbjct 797 GATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTAT 856
Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033
|| |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||||||
Sbjct 857 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 916
Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093
|||||| || || || | ||||| | || |||| | || |||||||||| ||| ||
Sbjct 917 GATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGT 976
Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153
||| |||||| | | | |||||||||| |||||||| ||| || ||| || ||
Sbjct 977 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAAC 1036
Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213
||| | || || || ||||||||||| || || ||||| || ||||| || ||||||||
Sbjct 1037 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGG 1096
Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273
|||| || ||||| | ||||| |||||||||||| | ||||| || || | ||
Sbjct 1097 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 1156
Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333
| | |||| ||| | | || | | ||||| || || || || ||||| ||||||||
Sbjct 1157 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACTT 1216
Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393
||||| || || ||| | ||||| |||||||| || |||||||| ||||||||||| ||
Sbjct 1217 CGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAAAAA 1276
Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453
|| ||||| ||||||||| ||||||| ||| | || || ||||| |||||||| ||
Sbjct 1277 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 1336
Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
| || | ||||||||||| || || ||||| || || || ||
Sbjct 1337 CCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560425381944000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |