Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 609 3e-169
seq25415 572 2e-158
>seq21827
Length=6214
Score = 609 bits (674), Expect = 3e-169
Identities = 716/963 (74%), Gaps = 8/963 (1%)
Strand=Plus/Plus
Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880
|| ||||| || | || ||||||||||| |||||||||| || | ||| | |||||
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117
Query 181881 ATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGA 181939
||||| || || | |||||| | || || ||||| || ||||| || ||||| || ||
Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176
Query 181940 ACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATC 181999
||| || |||| || || | ||||| ||||| || || |||||||| || | || |
Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236
Query 182000 CTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTG 182059
|| || || ||| | || || ||||| || |||||||| || || ||||||| ||
Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296
Query 182060 GCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC 182119
| | || || |||||||||| | || ||||| | ||||| | | || | || ||
Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGG--TGTA-GC 5353
Query 182120 CT---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTG 182176
| | ||||| ||||||||||||||| || ||| | |||||||| || |||||
Sbjct 5354 TTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGC 5413
Query 182177 TGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGG 182236
||| ||||| || ||||| || || || || ||||||| ||||| ||||||| | ||
Sbjct 5414 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGG 5473
Query 182237 TCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTT 182296
|||||| || || || | ||||| || |||||||| || || ||||||| ||| |
Sbjct 5474 TCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGAT 5533
Query 182297 GGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGG 182356
|| |||||||||||||||||||| |||||||| || || |||||||| || ||||| ||
Sbjct 5534 TGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGG 5593
Query 182357 TGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGT 182416
||||||||| || || || || ||||| ||||| ||||| ||||| || ||| | |
Sbjct 5594 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGAT 5653
Query 182417 CCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGA 182476
| | || || || || | || || || | ||||||| ||||||||||| |||||
Sbjct 5654 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 5713
Query 182477 GACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATC 182536
||||| || ||||| || || ||||| || || || || |||||||||||||| ||
Sbjct 5714 AACCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 5773
Query 182537 ATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTG 182596
||||||||||| ||||| || ||||||||||| ||||| |||||||| || || || ||
Sbjct 5774 TTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTG 5833
Query 182597 GTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCA 182656
|||||| || | ||| | ||| ||||| || ||| | || |||||||| ||||||||
Sbjct 5834 GTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCA 5893
Query 182657 GTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGC 182716
|| | ||||| |||| |||||||| |||| || ||||| ||| | | ||||||||
Sbjct 5894 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGC 5953
Query 182717 TGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGC 182776
| | |||||||||||||||||||| |||||||| || |||||||| |||||||| ||
Sbjct 5954 TAACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGC 6013
Query 182777 TGC 182779
|||
Sbjct 6014 TGC 6016
>seq25415
Length=1491
Score = 572 bits (634), Expect = 2e-158
Identities = 737/1011 (73%), Gaps = 8/1011 (1%)
Strand=Plus/Plus
Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252
||||||||| | | || || || || ||||| || ||||| || || | || ||
Sbjct 378 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 437
Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312
|| ||| ||| | ||| | || |||||| |||| || ||| | ||||| || |||
Sbjct 438 CCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGG 497
Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGT 183371
|||||||||||| | || ||||||| | ||||| ||| ||||| | || || || ||
Sbjct 498 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGT 556
Query 183372 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCA 183431
|| || |||||| | | | | || ||| | ||||||| ||||| ||||| | ||
Sbjct 557 TTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCACA 616
Query 183432 AGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGG 183491
||| || ||| || ||||| ||| | || || || |||| |||||| || || |||||
Sbjct 617 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGG 676
Query 183492 TGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTAT 183551
|| || | || || ||||||||| | || || |||||||||||||| | || |
Sbjct 677 CGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATT 736
Query 183552 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCT 183611
|| ||||| ||||| || || ||||| ||||| ||||| |||||||| |||||||||
Sbjct 737 ACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCCT 796
Query 183612 TATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAAT 183671
|| ||||| || ||||||||| ||||||||||| || ||||| || ||||| || ||
Sbjct 797 GATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTAT 856
Query 183672 CTTTAGAT---TCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCA 183728
||| ||| |||| || |||| ||||||| || || ||||| || ||||| || ||
Sbjct 857 ATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTTCA 913
Query 183729 TATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCAC 183788
|||||||||||||||||| || | || | || || || | ||||| ||||||| ||
Sbjct 914 TATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTAC 973
Query 183789 AGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTC 183848
||||| ||||| || | ||||||||| || ||||| |||||| ||| ||| | |
Sbjct 974 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCC 1033
Query 183849 CACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTT 183908
||||||| ||||| || ||||| ||||| || || || || || ||||| ||||||||
Sbjct 1034 AACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTT 1093
Query 183909 CGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCAT 183968
|||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || |
Sbjct 1094 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 1153
Query 183969 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGA 184028
||| | ||| | | || |||| | | || || || || ||||| ||||| |||||
Sbjct 1154 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGA 1213
Query 184029 TTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAA 184088
|| || ||| || ||| | ||||| |||||||| ||||||||||| |||||||| ||
Sbjct 1214 CTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAA 1273
Query 184089 GAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGA 184148
|| || || | || ||||| | ||||| ||| | || || ||||| || |||||
Sbjct 1274 AAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 1333
Query 184149 GAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
|| ||||||| || |||||||| |||| | || || ||||||| |||
Sbjct 1334 AAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 1384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611496740028000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |