Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq21827 645 4e-180 seq25415 553 2e-152 >seq21827 Length=6214 Score = 645 bits (714), Expect = 4e-180 Identities = 724/966 (75%), Gaps = 2/966 (0%) Strand=Plus/Plus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||||||||||| | || ||||| |||||| | |||||||| || | |||| || Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||||| || ||||| ||||| || || || || ||||||||||||||||| Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 |||||| | || |||||| | || || ||||| || || |||||||| | |||| | Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 |||| || || || | || || || || || |||||||| || || | |||||||| Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296 Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTG 165089 ||| ||||| ||||||||||| || | |||| | ||||| | | ||||||||||| Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356 Query 165090 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGT 165149 || |||||||||||||||||||| || ||| || |||||||| ||||||||| || Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 5416 Query 165150 AGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCA 165209 |||||| || ||||| || |||||| | || |||||| || ||||||| | ||||| Sbjct 5417 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCA 5476 Query 165210 AGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGT 165269 ||| || || ||||| ||||||||||| || |||||||||||||| |||| ||| | || Sbjct 5477 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5536 Query 165270 CTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 165329 |||||||| || || ||||| |||||||| || || |||||| | ||||| ||||| || Sbjct 5537 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5596 Query 165330 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCG 165389 |||||| || || || ||| |||||||||||| | || ||||| | || | Sbjct 5597 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5656 Query 165390 CGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGAC 165449 || || || |||| || | || | ||||| | || || ||||| ||||| || Sbjct 5657 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 5716 Query 165450 CTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTT 165509 ||| || ||||| ||||| || || || || || || | || |||||||| || || Sbjct 5717 CTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 5776 Query 165510 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTT 165569 |||||| || ||||| | ||||||||||| || || ||||||||||| ||||| ||||| Sbjct 5777 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTT 5836 Query 165570 CACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 165629 ||||||| | ||| ||||||| ||||| || ||| | || |||||||| |||||||| || Sbjct 5837 CACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATC 5896 Query 165630 TATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGTGCTGG 165689 | | ||||||||||| | || ||| |||||||| || | ||||||||| Sbjct 5897 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTAA 5956 Query 165690 TCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACCTCGCTGC 165749 |||||||||||||||||||||| ||||||||||| |||||||| || || || ||||| Sbjct 5957 CTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016 Query 165750 TGCCGA 165755 | ||| Sbjct 6017 GGTCGA 6022 >seq25415 Length=1491 Score = 553 bits (612), Expect = 2e-152 Identities = 719/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || |||||||||||||| |||||||| || || | || |||| ||| ||| | || Sbjct 396 GACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCC 455 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| | || || || || || || || |||||||| |||||| | ||| Sbjct 456 GTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCA 515 Query 166311 AGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGC 166369 || ||| |||| || ||||| ||| | || || |||||||||||||| || || Sbjct 516 AGTTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCCGCAGTTTCTACTCCTGCTAATAG 574 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 166429 | | | || ||| | | | || ||||| ||||| || ||||| ||||| | || Sbjct 575 TTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCACAAGGAGATTTTACTCGTTG 634 Query 166430 GTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGG 166489 ||| ||| | || || || ||| | ||||||||||| ||||| ||||| | ||||| || Sbjct 635 GTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGGCGCTTTCGGACTAATAGG 694 Query 166490 TTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAA 166548 ||||||| | || || |||||| | ||||| ||| | | | || || || ||||||| Sbjct 695 TTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TACGACCTTATAATGCAA 753 Query 166549 TCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTC 166608 |||| || || ||||| ||||| || || ||| ||| || || || || || || |||| Sbjct 754 TCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGGTC 813 Query 166609 AATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTT 166668 | || ||||||| || || ||| ||| || || | || || || |||||| |||| | Sbjct 814 AGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCT 873 Query 166669 TCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTA 166728 | | ||||| || || || |||||| |||||||||||||||||||||| || || || Sbjct 874 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGGG 933 Query 166729 TTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATC 166788 | | || | ||| |||| | || || ||||||| ||| ||||| || ||| | | | Sbjct 934 TATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTG 993 Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCT 166848 |||||||||| |||||||| ||| ||| || || | ||||||| |||||||| | Sbjct 994 AAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTT 1053 Query 166849 ATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 166908 |||||||||| || || ||||||| |||||| || ||||| || |||| ||| |||| Sbjct 1054 ATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATA 1113 Query 166909 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCA 166968 | | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | Sbjct 1114 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTC 1173 Query 166969 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAA 167028 | || | | ||||| || || || || ||||| |||||||| ||||| || ||| | Sbjct 1174 TTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACTTCGTTTCTCAGGAAATCC 1233 Query 167029 GGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGG 167088 | ||||| || ||||| || ||||| || ||||| ||||| || |||||||| || || | Sbjct 1234 GTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAG 1293 Query 167089 GTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAG 167148 |||| ||| |||||||||| || ||||| |||||||| | | |||||||||| | Sbjct 1294 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 1353 Query 167149 AGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 ||||||| || | || |||||||| ||| Sbjct 1354 AGGTTCTACCCCGTGGAAACGCTCTTTAA 1382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563477187494400