Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015290.1
Length=182180
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 529 2e-145
>seq21827
Length=6214
Score = 529 bits (586), Expect = 2e-145
Identities = 698/968 (72%), Gaps = 0/968 (0%)
Strand=Plus/Plus
Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758
||| |||| ||||| | ||||| | || |||| ||||| ||||| |||||||||||
Sbjct 5040 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 5099
Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818
|||| | ||| | | ||||| | |||||||| || || || || || ||
Sbjct 5100 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGAT 5159
Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878
|| ||||| || | |||||||| | || || | | ||||| ||||| || || |||
Sbjct 5160 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCT 5219
Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938
||||| || |||| |||| || || ||| | || || || || || ||||||||
Sbjct 5220 GGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCG 5279
Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998
|| | | ||||| ||||| || || |||||||||||| | || || | | |||||
Sbjct 5280 GCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTT 5339
Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058
| | || | || || |||||| | |||||||||| | |||| | ||||||
Sbjct 5340 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 5399
Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118
|| |||||||| ||| |||||||| ||||| || |||| || ||||| |||||
Sbjct 5400 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 5459
Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178
| ||||| | ||||| ||| || || ||||| ||||||||||| ||||| |||||
Sbjct 5460 ATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACT 5519
Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238
|| ||||||||| | ||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct 5520 TTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATG 5579
Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298
||| || |||||| | ||||| || | || ||| || ||||| ||||| | |||
Sbjct 5580 TTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 5639
Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358
|| ||| | | ||||| || || ||||| || || || || | || |||| ||||
Sbjct 5640 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 5699
Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418
|| ||||| |||||||| ||||| || || || || ||||| || ||||| || | |||
Sbjct 5700 GGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATC 5759
Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478
|||||||||||||| || ||||| |||| | | ||||||||||| ||| | | |||
Sbjct 5760 TTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCT 5819
Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538
|||||| | || ||||| ||| | | |||||| |||| ||||| |||||| | |||||
Sbjct 5820 GTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGT 5879
Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598
|| || |||||||| || | || ||| | ||| ||| || ||| ||||| ||
Sbjct 5880 TTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGAT 5939
Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658
|| | ||| | || ||| | ||||||||||| |||||||| ||||| || || ||||||
Sbjct 5940 ATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTC 5999
Query 170659 CCACTTGA 170666
|| || ||
Sbjct 6000 CCTCTAGA 6007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582658137264000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |