Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq10742 134 3e-26
seq4874 127 5e-24
>seq10742
Length=3397572
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | || || || | ||| || ||||| || |||||||| ||||| || | || ||
Sbjct 2148454 TCTCAATCGCAGCACCAAGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAGAGGGT 2148513
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||||||||| ||||| || || | |||||||| ||||| || ||
Sbjct 2148514 GCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGAGGGATACC 2148573
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||| || || ||| ||||||||| ||||||||||| | |||||| || |
Sbjct 2148574 CTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCCACCTCCAA 2148633
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || |||| || || || || | |||||
Sbjct 2148634 AGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148675
Score = 127 bits (140), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || || || ||||| || | ||||| | ||||||||
Sbjct 2148695 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCT 2148754
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| ||||| || || | || || || |||||||| || ||||||||||||
Sbjct 2148755 AGCTGCTTACCAGCGAAAATCAGCCTCTGCTGATCAGGAGGAATACCCTCTTTGTCTTGA 2148814
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
||||| || || |||||||||||||| ||| ||| || || | || | |||
Sbjct 2148815 ATTTTGGCTTTCACATTCTCAATGGTGTC---ACTTGGTTCAACCTCCAAAGTGATGGTC 2148871
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || || || | |||||
Sbjct 2148872 TTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148903
Score = 104 bits (114), Expect = 5e-17
Identities = 152/214 (71%), Gaps = 6/214 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || || || ||||| || | ||||| | ||||||||
Sbjct 2148923 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCT 2148982
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || || || || | || ||||| ||||| || ||||| || || ||
Sbjct 2148983 AGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATACCTTCCTTATCCTGG 2149042
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| ||||| ||||| ||||| ||| || ||||| | || | ||
Sbjct 2149043 ATCTTGGCCTTCACGTTTTCAATTGTGTC---ACTCGGCTCAACTTCCAAAGTGATGGTT 2149099
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || |||| || || || || | |||||||
Sbjct 2149100 TTACCAGTCAGGGTCTTAACAAAGATCTGCATTT 2149133
>seq4874
Length=535125
Score = 127 bits (140), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || ||||| ||||| || || ||||| |||| || || | ||||||||
Sbjct 502695 ACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 502636
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || | || || ||||| ||||||||||| ||||| ||
Sbjct 502635 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 502576
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| ||||| ||||| ||||| ||| ||||| || || |||| |||
Sbjct 502575 ATCTTGGCCTTCACGTTTTCAATAGTGTC---ACTGGGCTCCACCTCCAGAGTAATGGTC 502519
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | ||||| || || | |||||
Sbjct 502518 TTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502487
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || ||||| || || || || ||||| || || ||||| |||| || ||
Sbjct 502252 TCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAGAGGGT 502193
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| |||||||| || |||||||| || | || || ||||| ||||||||
Sbjct 502192 GCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCC 502133
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||| ||||| || || || ||| ||||| ||||||||||| ||| ||||| ||
Sbjct 502132 TTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTC---ACTGGGCTCCACCTC 502076
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| || || | ||||| || || | |||||
Sbjct 502075 CAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502031
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || ||||| || || || || ||||| || || ||||| |||| || ||
Sbjct 502480 TCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAGAGGGT 502421
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| |||||||| || |||||||| || | || || ||||| ||||||||
Sbjct 502420 GCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCC 502361
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||| ||||| || || || ||| ||||| ||||||||||| ||| ||||| ||
Sbjct 502360 TTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTC---ACTGGGCTCCACCTC 502304
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| || || | ||||| || || | |||||
Sbjct 502303 CAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502259
Score = 118 bits (130), Expect = 2e-21
Identities = 154/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || ||||| ||||| || || ||||| || | || || | ||||||||
Sbjct 502923 ACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCA 502864
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || || ||||| ||||||||||| ||||| ||
Sbjct 502863 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 502804
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| ||||| ||||||||||| ||| ||||| || || || | |||
Sbjct 502803 ATCTTGGCCTTCACGTTTTCAATGGTGTC---ACTGGGCTCCACCTCCAGAGTGATGGTC 502747
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | ||||| || || | |||||
Sbjct 502746 TTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109111151028020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |