Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 619 1e-172
>seq21827
Length=6214
Score = 619 bits (686), Expect = 1e-172
Identities = 730/985 (74%), Gaps = 2/985 (0%)
Strand=Plus/Minus
Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032
|| ||||| | ||||||||||| ||||||||||| ||||| ||||||||||| |
Sbjct 6013 GCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAGTTA 5954
Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092
||||| || | | ||| ||||||||||| | ||||| ||| ||||| || | |
Sbjct 5953 GCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5894
Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152
|| ||||| || || ||||| | ||||| ||||| ||||||| ||| | ||||| |||
Sbjct 5893 TGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 5834
Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212
||||| || || || ||||||||||| | ||| ||||| | ||||||| ||||||||
Sbjct 5833 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 5774
Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272
|||||| |||||||| | || || || || || |||||||| || ||||| || |||
Sbjct 5773 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAGGTT 5714
Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332
|| || ||||||||||| ||||||| | || || |||||||||| ||||| | |
Sbjct 5713 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 5654
Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392
|| | | |||||| || | ||||||||||| ||| |||||| | || |||||||||
Sbjct 5653 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 5594
Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452
||||| || || ||||||||||| || |||||||||||||| || || || ||||| |||
Sbjct 5593 CCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 5534
Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512
| |||| ||||||| || || ||||| || || ||||| || ||||| || |||||
Sbjct 5533 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 5474
Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572
|| | ||||| | | ||| ||||||| || |||||||| ||||| || || ||||||
Sbjct 5473 CCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 5414
Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632
||||| || |||||||| ||||| | ||||||||| ||||||||||| ||| |
Sbjct 5413 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 5354
Query 84633 AATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCAT 84692
| |||||| | ||||| | |||| || | |||||| |||||||| |||| ||||
Sbjct 5353 GCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 5294
Query 84693 TCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGAT 84752
|| || | || |||||||| || || || ||||| | ||| || || ||| |
Sbjct 5293 TCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGAAGTA 5234
Query 84753 GGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCA 84812
|||| | |||||||||||| || |||||||| || | ||||| |||| || || |||
Sbjct 5233 GGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 5174
Query 84813 CGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGT 84871
|| ||||| |||||||| || || || ||| ||| ||| || || || || ||||| |||
Sbjct 5173 CGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA-AGT 5115
Query 84872 GGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTT 84931
|| | | || || || ||||| | | |||||||| |||| || | |||||| |
Sbjct 5114 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 5055
Query 84932 AGTGGAGGTGACCCAATCACAGAAG 84956
|||| ||| | ||| | |||||||
Sbjct 5054 AGTGCTGGTTATCCAGTTACAGAAG 5030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571087507624800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |