Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq21827 464 2e-126 >seq21827 Length=6214 Score = 464 bits (514), Expect = 2e-126 Identities = 695/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || ||||| |||||||| || | |||||||| || || | Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | || ||||| || || || Sbjct 5091 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCCC 5149 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || || | || |||||||| Sbjct 5150 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 5209 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | |||||||||||||| Sbjct 5210 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGAT 5269 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 |||||||| | | | || || ||| |||||||||| || || ||| | || ||| | Sbjct 5270 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 5329 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 | ||||| ||| | || ||||| ||| || | |||||||||| || | | Sbjct 5330 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 5389 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 || || ||| | || ||||| |||||||||| |||| || | | || ||| || Sbjct 5390 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 5449 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 || ||||| | ||||| | || ||||| || ||| ||| || |||||||| || || Sbjct 5450 TGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 5509 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 |||||||||||| ||||| ||| | ||||||||||| || || || || || |||||||| Sbjct 5510 CTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 5569 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400 ||| || ||| || || ||||| || ||||| || | || ||| ||||||||| || Sbjct 5570 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 5629 Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGG 26460 ||||| ||||| | || ||||| ||||| | | || ||| | || Sbjct 5630 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 5689 Query 26461 CTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 26520 || | || || ||||| ||||| || || ||||| || ||||| || || || ||||| Sbjct 5690 TTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGG 5749 Query 26521 GAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGC 26580 |||| || || || ||||| ||||| || ||| |||||| | || ||||| || || Sbjct 5750 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGC 5809 Query 26581 TACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAA 26640 | ||||||| || || || || ||| | || || | ||||| |||| ||||| ||||| Sbjct 5810 TGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAA 5869 Query 26641 CCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTAC 26700 | |||||||||| || || ||||| || ||||| ||| | | || |||| ||| Sbjct 5870 CTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5929 Query 26701 ATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGC 26760 ||||||||| | | ||||| |||||| | || | ||||||||||| || ||||| || Sbjct 5930 CTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACGC 5989 Query 26761 TCATAACTTTCCACTTGACTTAGC 26784 ||||||||| || || || |||| Sbjct 5990 TCATAACTTCCCTCTAGATCTAGC 6013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146680993681440