Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_016658.1
Length=47741
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 506 6e-139
>seq21827
Length=6214
Score = 506 bits (560), Expect = 6e-139
Identities = 706/987 (72%), Gaps = 2/987 (0%)
Strand=Plus/Minus
Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251
|| |||||||| || |||||||| ||||| || ||||| ||||| ||||||||||| | |
Sbjct 6016 GCAGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAG 5957
Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311
|| |||||||| | | ||| ||||| || || | | ||| | ||||| ||
Sbjct 5956 TTAGCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 5897
Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371
|| || ||||| || || || || | ||||||||||||||| || || | || ||
Sbjct 5896 GATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTG 5837
Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431
| ||| || | || || ||||||| ||| |||||||| |||||| ||| |||||
Sbjct 5836 AACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTG 5777
Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491
|| |||||||| |||||||| | || ||||| || |||||||| || || || || ||
Sbjct 5776 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAG 5717
Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551
|||||||||||||| |||||| | || || | || ||| | | || |||||
Sbjct 5716 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 5657
Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611
| || | |||||| || | |||||||||||| ||| | | || ||||||
Sbjct 5656 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 5597
Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671
|| ||||| || || | |||||| || || ||||||||||| ||||| || || ||||||
Sbjct 5596 ACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAAT 5537
Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCC 5731
|| | ||| ||||| |||||||||||||| || ||||||||||| ||| || |||||
Sbjct 5536 ACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCT 5477
Query 5732 TGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790
|| || | || || | || || || | ||||| | || ||||| || |||||||||||
Sbjct 5476 TGACCAATTGGATAGATCAAGAAAACAGCAGTAG-CAGCTGCAACAGGAGCTGAATATGC 5418
Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850
|| |||||| || ||||| || | | | ||||||||||||| | || |||| ||
Sbjct 5417 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 5358
Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910
| || | ||||| | ||||| | || | || | || || || |||||||| |
Sbjct 5357 ACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAA 5298
Query 5911 CCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGA 5970
||||||||| | || |||||||| || || || || || || || || || ||
Sbjct 5297 CCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGA 5238
Query 5971 GCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGG 6030
| || | || ||| || || || || ||||||||||| ||||||||||| | || ||
Sbjct 5237 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGG 5178
Query 6031 TTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGT 6090
|||||| || || || || || || || || ||||| | ||| || | |||||| |||
Sbjct 5177 TTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA 5118
Query 6091 AGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTT 6150
||||||||| || | | || ||||| || ||||||||||| || | || || |||||
Sbjct 5117 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 5058
Query 6151 GTTGGTGCTAGTAACCCAGTCACAGAA 6177
| ||||| || | ||||| ||||||
Sbjct 5057 TTCAGTGCTGGTTATCCAGTTACAGAA 5031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152602360673160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |