Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq16203 114 1e-20
>seq16203
Length=1080995
Score = 114 bits (126), Expect = 1e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927
||| || |||| ||| || ||||||||||| || || | || ||||| || || || ||
Sbjct 991562 TAGTCCTGTGATGTGGGCGATCATGTACGTTAGAAGTGCATAACTGGCAATATTGAAAGG 991503
Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 29987
||| || ||||||||||| || || | ||| || ||||| || || ||||| || || |
Sbjct 991502 TACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCACCATCACA 991443
Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG 30030
||| || |||||||| | | ||||| || || |||||||||
Sbjct 991442 CACATAGAACTGACAAAGAGCATGGCATGGGGGCAGAGCCATG 991400
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 30157 GTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 30216
||||||||||| || || || |||||||| || || || || || || |||||||||||
Sbjct 991094 GTGTACTCTGCCCCAAAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTCTCCCTCC 991035
Query 30217 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30276
|| | | || || | ||||||| || || | || || ||||| ||||| |||
Sbjct 991034 TCTCGATTAGTAAATCCATTGTTGTCCAGGAATTCACGAGACCCATTGGCATCCCAAATC 990975
Query 30277 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
|| ||||| || | |||||||||||||| || || || ||
Sbjct 990974 TTCACCCCTTTTGCAGAGAGCTCTTTGGAATTGGTTGATCC 990934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408487820496380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |