Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_019443.1
Length=172879
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 567 8e-157
>seq21827
Length=6214
Score = 567 bits (628), Expect = 8e-157
Identities = 723/990 (73%), Gaps = 14/990 (1%)
Strand=Plus/Plus
Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561
||||||||| | ||| ||| || || | || | || ||||| ||||| ||||||
Sbjct 5034 TGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATG 5093
Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621
|||||| ||| | | ||| | || || || || || |||||||| || |||||
Sbjct 5094 ATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCG 5153
Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681
|| ||||| |||||||| | ||||||||| | || || || || ||||| ||||| ||
Sbjct 5154 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 5213
Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741
|| |||||||| | |||||| ||| || || ||| | || || || || || |||
Sbjct 5214 ATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGG 5273
Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTC 162801
||||| || | ||||||| ||||| || |||||||| |||| | || | || |
Sbjct 5274 GAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 5333
Query 162802 CACTTCCTTATCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGC 162858
||||| | | || | ||| | | | |||||| ||||||||||| || |||
Sbjct 5334 CACTTTTTACTTGGTGT---AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 5390
Query 162859 TTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCT 162918
| |||||||| |||||||| ||||||||| || || || || | || || |||
Sbjct 5391 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 5450
Query 162919 GTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATT 162978
|| |||||| ||||||| | |||||||| || ||||||| |||||||| || ||
Sbjct 5451 GTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATC 5510
Query 162979 TCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCC 163038
||||||||||| |||| |||| | || |||||||| |||||||||||||| ||||||||
Sbjct 5511 TCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 5570
Query 163039 TTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGT 163098
|| || ||| | || || || ||||||||||| || || || || ||||||||||| |||
Sbjct 5571 TTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 5630
Query 163099 TCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGT 163158
|| | || |||||| | | ||||| ||||| || || | || || || | |||
Sbjct 5631 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 5690
Query 163159 TATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGT 163218
|| | ||||| ||||| ||||| || ||||| || || ||||||||||| || |||||
Sbjct 5691 TACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGGC 5750
Query 163219 CGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCT 163278
|| ||||||||||| ||||| |||||||||||| ||||| | ||||||||||| |||
Sbjct 5751 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCT 5810
Query 163279 GCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAAC 163338
|| | ||||| || | || ||||||||||| | ||| | |||||||| || |||
Sbjct 5811 GCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAAC 5870
Query 163339 CTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCT 163395
| || |||||||| ||||||||||| || ||||| |||| || || ||| |
Sbjct 5871 TTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGT---GTAATTAAT 5927
Query 163396 ACTTGGGCAGATATCCTTAACAGAGCAGGACTT-GGTATGGAAGTTATGCACGAGCGTAA 163454
|| ||||| ||||| | ||| | || |||| ||||||||||||||||| || |||||
Sbjct 5928 ACCTGGGCTGATATTATCAACCGTGC-TAACTTGGGTATGGAAGTTATGCATGAACGTAA 5986
Query 163455 TGCTCACAACTTCCCACTTGACCTTGCTGC 163484
||||| |||||||| || || || |||||
Sbjct 5987 CGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552904632626400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |