Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_019444.1
Length=176043
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 538 4e-148
seq25415 509 2e-139
>seq21827
Length=6214
Score = 538 bits (596), Expect = 4e-148
Identities = 697/960 (73%), Gaps = 2/960 (0%)
Strand=Plus/Plus
Query 162919 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 162978
||||| || || | || ||||| || || ||||||| || || | ||| | ||||||
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117
Query 162979 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGTGA 163037
||||| || || |||| ||| | ||||| || || || || ||||| || || |||||
Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176
Query 163038 GCCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATC 163097
|| || |||| || || | ||||| ||||| || || |||||||| || |||| |
Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236
Query 163098 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 163157
||| || || ||| | || || || || || |||||||| || || ||||||| ||
Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296
Query 163158 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 163217
| | || || |||||||||| | || | || | ||||| | | || | |
Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356
Query 163218 ATATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGT 163277
|||||||| ||||| ||||||||| | || | ||||||||||| ||||| |||
Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 5416
Query 163278 AGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCA 163337
||||| || || ||||||||||| || | || || ||| || ||||||| | |||||
Sbjct 5417 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCA 5476
Query 163338 AGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATGCTTGT 163397
||| || ||||||| ||||| || || |||||||| || ||||||| |||| ||||
Sbjct 5477 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5536
Query 163398 CTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGTGT 163457
|||||||| |||||||||||||| |||||||| || || ||||| || || ||||||||
Sbjct 5537 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5596
Query 163458 CTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACTCGTCCG 163517
||||| || || || ||| || |||||||| | || || ||| | || |
Sbjct 5597 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5656
Query 163518 TGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGAC 163577
|| || || |||| ||| || || | ||||||| || |||||||| ||||| ||
Sbjct 5657 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 5716
Query 163578 ATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCATT 163637
||||| ||||| || || ||||| || || || || ||||||||||||||||| ||
Sbjct 5717 CTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 5776
Query 163638 CAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAATCTGGTT 163697
||||||| | | | ||||||||||| || || |||||||| || || || |||||
Sbjct 5777 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTT 5836
Query 163698 TACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 163757
||||| | || | ||||| ||||| || ||| | || |||||||| |||||||| ||
Sbjct 5837 CACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATC 5896
Query 163758 CATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGG 163817
| ||||| |||| |||||||| | || || ||||| || | | ||||| |||
Sbjct 5897 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTAA 5956
Query 163818 TCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTGC 163877
|||||||||||||||||||||| |||||||| || |||||||| || ||||| |||||
Sbjct 5957 CTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 509 bits (564), Expect = 2e-139
Identities = 721/1008 (72%), Gaps = 4/1008 (0%)
Strand=Plus/Plus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | | || || || |||||||| || ||||| || || | || ||
Sbjct 378 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 437
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | ||| | || |||||| |||| || ||| | ||||| || |||
Sbjct 438 CCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGG 497
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTCACAGCAGCTGT 164797
|| |||||||| | || ||||||| | ||||| ||| ||||| | || || || ||
Sbjct 498 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGT 556
Query 164798 CTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCA 164857
|| || |||||| || | | | || ||| | | |||| ||||| ||||| | ||
Sbjct 557 TTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCACA 616
Query 164858 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGG 164917
|| |||| || ||||| ||| | || || || |||| ||| || ||||| |||||
Sbjct 617 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGG 676
Query 164918 TGCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTA 164976
|| |||| ||||| ||||||||| | || || ||||| || || || ||| | |
Sbjct 677 CGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT- 735
Query 164977 TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCC 165036
| || ||||| ||||| || || ||||| ||||| ||||| |||||||| || ||||
Sbjct 736 TACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCC 795
Query 165037 TTATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAA 165096
| || || || || |||||||| ||||||| || || || ||||| || || || |
Sbjct 796 TGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTA 855
Query 165097 TCTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATA 165156
| ||| ||||| | | || | ||||| || || || ||||| | ||||| || ||||
Sbjct 856 TATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATA 915
Query 165157 TGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAG 165216
||||||| ||||| || | ||||| | || |||||| ||||||||||| | || |
Sbjct 916 TGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCG 975
Query 165217 TTGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGA 165276
| |||||||| |||| || ||||| || |||||||| || ||| ||| | | |
Sbjct 976 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAA 1035
Query 165277 CACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCG 165336
| || | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| |
Sbjct 1036 CTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTG 1095
Query 165337 GCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGG 165396
| |||| ||||| || || || ||| | ||||| || ||||| ||||| || || | |
Sbjct 1096 GGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCG 1155
Query 165397 GTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATT 165456
|| | |||| || |||| | | ||||| || || || || ||||| || || |
Sbjct 1156 GTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACT 1215
Query 165457 TCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAA 165516
|||| |||||| ||| | ||||| |||||||| ||||||||||| |||||||||||||
Sbjct 1216 TCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAAAA 1275
Query 165517 ACATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAA 165576
| || || || || ||||| | ||||||||| |||| || ||||| || |||||||
Sbjct 1276 ATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAA 1335
Query 165577 ACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
|| |||| ||||| || || || | || | || ||||| |||||||
Sbjct 1336 ACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 1383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563026134472800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |