Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 257 3e-63
seq20909 194 3e-44
seq24544 187 5e-42
seq19395 163 5e-35
seq3913 141 2e-28
seq22773 93.3 8e-14
seq20084 89.7 1e-12
seq20831 87.8 3e-12
>seq18889
Length=1054283
Score = 257 bits (284), Expect = 3e-63
Identities = 969/1503 (64%), Gaps = 48/1503 (3%)
Strand=Plus/Plus
Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTA 212916
||| ||||||||||| || |||| | || ||| ||| | ||| || ||||| || |
Sbjct 963998 CATCTCCTCGTTCCACAGCCCCC-GTTCAGTTAGGTCCTTCAGCAGATGTGGGTTTACAA 964056
Query 212917 TCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGC 212976
|||| || || || || || || || | ||| | ||| ||||||| ||||||
Sbjct 964057 TCTGAAACTCTCCAGACAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGG 964116
Query 212977 TCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGAC 213036
||| ||||| || || || || || ||| |||||||||||| || |||| || || |
Sbjct 964117 ACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATAGGGGCCAACAACAGGC 964176
Query 213037 TGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAG 213096
|||||||||| ||||| | | || | |||| ||||||||| |||
Sbjct 964177 TGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGAGCTCAG 964236
Query 213097 ACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGC 213156
| ||| ||| |||||||| | |||| ||||| | ||||| |||
Sbjct 964237 TGGGCACCTTTTCC---------CACATGTCGTATTGCAGAATGCCCCTACTCACTGGGG 964287
Query 213157 TGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGG 213216
||| |||| | || || || | || | |||| ||||||| |||| |||||
Sbjct 964288 AGCCTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCCAACTCGCAGCTTGCCTCCAGGG 964347
Query 213217 CAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTG- 213275
|||| ||||||||||||||||| |||| | || ||| || ||| || | || |
Sbjct 964348 CAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGA--ACTTTC 964405
Query 213276 AAGGGCATCAT-CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGG 213334
|| | || | |||| | ||| |||| || || ||||| || ||||| || || ||
Sbjct 964406 AAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCGATCCCAATTGG 964465
Query 213335 TCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG----GGGTAAAAGTTGCAGTCGA 213390
||||| | | ||| || || | || || || | ||||| |||| ||| |
Sbjct 964466 CCTGTGGCGCTTGTTTGAATT----CTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAA 964521
Query 213391 TGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGA 213450
||||||| ||||| || | ||||| ||||| ||| || | | | || |
Sbjct 964522 TGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTGAGGCAAGCTTTTTGAAATCAA 964581
Query 213451 ACACGTAGCCCCCGTCCTGCACAAACT--CAGGC--AGGGCGATGCTGGCCAGGTTGCAA 213506
| | ||| ||| | ||| || | || || || ||||| ||| ||
Sbjct 964582 AGGTG-------CGTTCTGGAGTAACATACATGTTGAGAGCAATTGAGGCCAAGTTACAG 964634
Query 213507 ACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566
||||| || || | | ||| ||||||| ||||| ||||||| ||| |||||| |
Sbjct 964635 ACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTG 964694
Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAG 213626
|||||||||| ||||| ||||| ||| ||| | ||| ||||| | ||||||
Sbjct 964695 ATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAA 964754
Query 213627 GGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGA 213684
|| | || || ||| ||| ||| | | || ||| ||| | | | |||||||
Sbjct 964755 GGTGTTCCCGTTTCTGTCTGAGACTCTATGAT--GGCATACCACACCTGCTGAGCCTTGA 964812
Query 213685 CCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGT 213744
|||||||| | || || | | | || || || ||| |||| | || || |
Sbjct 964813 CCACCCGCTTCACT-CTACCCTCCTGT--TCATATCGTGTGTACAGCTTCTCAAACTCCT 964869
Query 213745 GGCCCCAGACCCTG-TCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803
||||| || || |||| || || || ||||||||| | ||||||| |
Sbjct 964870 CCCCCCA-ACACTCATCCAACCCAGGGCACTCACTGGGACACATCAAAGACCAGTCCTGG 964928
Query 213804 TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTG 213863
| | | ||||||| |||||||||||| |||| ||| || || ||| ||||| |
Sbjct 964929 TTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAGAAGAGGTCTCGC 964988
Query 213864 GTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCG 213923
| |||| ||| || |||| ||| || ||| || ||||||||||| | || |
Sbjct 964989 GCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGAAAGTCAAACACATCAAAG 965048
Query 213924 TGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCAC- 213979
||||| ||||||| ||| ||||||||||| ||||| | | ||||| || ||||||||
Sbjct 965049 TGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTATTGCCACCTTGGTCCACA 965108
Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039
||| | || ||||| | | | ||| | || || || || || || | || ||
Sbjct 965109 TAGCGT-GCAGTGTTGTTGTACACTCTCAGCATCGGCACAAGACCATTTGAGTTACCATT 965167
Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACC 214099
||||| || || || || | | || | ||| | | | || || || ||
Sbjct 965168 TGTTCCAGCAATGTAACTTCCTGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCC 965227
Query 214100 GGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTC 214159
|| | || ||||| | || || | ||| || || ||||| | ||||||||
Sbjct 965228 TGCAGATTTAGAGATAAGAGCACATTGTTTCAGTGTGTCATAAATGCCATCAATGCTGTC 965287
Query 214160 ATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAA 214219
||| | | | ||||| ||||||||| ||||||||||| ||| | ||| | ||||||
Sbjct 965288 ATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTGTTAGTGCCTGCGTTGAA 965347
Query 214220 AAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279
|| ||||| |||||| | | |||| | ||| || || |||||||||| | | |
Sbjct 965348 CAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGC 965407
Query 214280 TGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCT 214339
|| || || |||||||| | ||| ||||| ||||||||||| || |
Sbjct 965408 TGCATCTATATCAGAGTTGTGGATTCCGACAGCTACTCTCATGAGCATGTGCTGTGGGCG 965467
Query 214340 CTC 214342
|||
Sbjct 965468 CTC 965470
>seq20909
Length=259154
Score = 194 bits (214), Expect = 3e-44
Identities = 190/245 (78%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448
|||||||||| || | |||| |||||||| ||||||||| || |||||||||||||
Sbjct 26223 GCTGACAGCCACTGCTTACGTGCGTCAGGACCTTCTGTTTGAGCTGAGCCACCTGGTCCC 26282
Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508
|||| || |||||||| |||||||| || ||||||||| || ||||| || ||||| |
Sbjct 26283 GCAGCACTGACGCGGTGTTGGACAGCCCCGCGTTGTCACTTTTCAGCACTTTTACTTTTT 26342
Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568
|||||||||| || ||||| || || ||||| || || || || || || |||| ||||
Sbjct 26343 CCTCCAGCCGGGCAATGCGCTCGAGCTTGCGTCGCCGACACTTAGTAGCAGCCAGTCGGT 26402
Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGACT 241628
||| || ||||| | || || ||||| || |||||| ||||| ||||| || |||
Sbjct 26403 TCCTCAGCCTCTTCCTCTCGGCTTTGATCCGCTCCTGGGTCTCCAGATCGATGGGGGACA 26462
Query 241629 TGGGT 241633
| |||
Sbjct 26463 TTGGT 26467
Score = 98.7 bits (108), Expect = 2e-15
Identities = 90/115 (78%), Gaps = 8/115 (7%)
Strand=Plus/Plus
Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985
|||||||||| || |||||| |||||||||| || |||||||| |||||||| |||||||
Sbjct 26256 TCTGTTTGAGCTGAGCCACCTGGTCCCGCAGCACTGACGCGGTGTTGGACAGCCCCGCGT 26315
Query 238986 TATCAGACTTGAGCA--------TTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032
| ||| || |||| || ||||||||||| || ||||| || |||||
Sbjct 26316 TGTCACTTTTCAGCACTTTTACTTTTTCCTCCAGCCGGGCAATGCGCTCGAGCTT 26370
>seq24544
Length=696746
Score = 187 bits (206), Expect = 5e-42
Identities = 187/241 (78%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 241389 GCTGACAGCC--TTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTC 241446
|||||||||| | |||||||| || | || | |||||||||||||| ||||| ||
Sbjct 648242 GCTGACAGCCACTACTCACATGTGTCATA--ACTTTTTGTTTGAGTTGGGCTACCTGCTC 648185
Query 241447 CCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTT 241506
||||| || || |||||||| |||||||| |||||||| | || || ||||| |||||
Sbjct 648184 GCGCAGCACAGAAGCGGTATTTGACAGTCCGGCGTTGTCCGTTTTCAGGACCTTAACTTT 648125
Query 241507 CTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCG 241566
|| ||||| || || || ||||||||||| || | |||||||||| |||||||| |
Sbjct 648124 TTCTTCCAGACGAGCAATACGTTCCAGTTTTCGTCTCCGGCATTTGGAGGCTGCCAGTCT 648065
Query 241567 GTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626
||||| || | ||| || || || |||||||| || |||| ||||| ||||| |||||
Sbjct 648064 GTTCCTCAGACGCTTGCGCTCGGCTTTGATGCGCTCTTGGTTCTCCAAATCGATGGGAGA 648005
Query 241627 C 241627
|
Sbjct 648004 C 648004
>seq19395
Length=23913
Score = 163 bits (180), Expect = 5e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||||||||| || |||||||||||||||| || |||||||| | |||
Sbjct 3030 AGGACCTTCTGTTTGAGCTGCTCCACCTGGTCCCGCAGCACAGACGCGGTGGACGCCAGG 2971
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | | ||| || ||||||||| ||||| || | | |||||| ||||||
Sbjct 2970 TCCGTGTTCTGGGTCTTCAGGCTCTTCACTTTGTCCTCGAGTCTGGAGATGCGCTCCAGT 2911
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
||||| |||||||| |||| ||| || | |||||| || |||||||| | || ||||||
Sbjct 2910 TTGCGGCGGCGGCACTTGGAGGCGGCGATGCGGTTGCGCAGTCTCTTCCTCTCGGCCTTG 2851
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| ||||| ||||||||||| || |||
Sbjct 2850 ATGCGCTCCTGTGAGTCCATGTCGATGGGGGAC 2818
>seq3913
Length=546623
Score = 141 bits (156), Expect = 2e-28
Identities = 167/226 (74%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 241402 GCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGC 241461
|| || ||| | || ||||| ||||||||| || |||||||| || ||||| ||| |||
Sbjct 56770 GCTCACGTGACTCATGACCTTCTGTTTGAGCTGTGCCACCTGCTCGCGCAGGACGCTCGC 56711
Query 241462 GGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGC 241521
||| | ||| | | ||| | | ||| || ||| ||||| ||||| ||||| |
Sbjct 56710 GGTGGATGCCAGCTCAGTGTTTTGTGTCTTTAGTGTCTTTACTTTGTCCTCGAGCCGAGA 56651
Query 241522 GATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTT 241581
||| || |||||||| || |||||| |||| ||| || | |||||| || || ||||
Sbjct 56650 GATACGCTCCAGTTTACGTTTGCGGCACTTGGAGGCGGCGATGCGGTTGCGCAGCTTCTT 56591
Query 241582 ACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
|| || ||||||||||| ||||||| |||||||| || || |||
Sbjct 56590 GCGCTCTGCCTTGATGCGCTCCTGGTTGTCCATGTCAATGGGCGAC 56545
>seq22773
Length=730387
Score = 93.3 bits (102), Expect = 8e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977
||| || || ||||| |||||||| | ||||| ||| ||||| | ||| |||
Sbjct 299220 CTGAAACTCCCCTGAAAGCACCCTGCGAGTGTAAATGTTGCTGGTGTAAGCCTCAATGGA 299279
Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037
||| ||||| || || ||||| ||||| |||||||||||| || |||| ||||| ||
Sbjct 299280 CTCATTGTTGCCGAGGATCTGGGCAGTAGAGGCTGTGGGCATTGGGGCCAGGAGGAGGCT 299339
Query 213038 GTTCCTCACTCCGTGC 213053
||||||||| || |||
Sbjct 299340 GTTCCTCACACCATGC 299355
Score = 87.8 bits (96), Expect = 3e-12
Identities = 124/171 (73%), Gaps = 4/171 (2%)
Strand=Plus/Plus
Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586
|||||| || | ||||| ||||||||||||||| | ||||||||| || ||||| ||
Sbjct 300295 TGTGTATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCCTAGATTCTGCTG 300354
Query 213587 GTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646
||| ||| ||| | ||| |||||||||||||| |||| || |||||| |||
Sbjct 300355 GTTGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTG 300414
Query 213647 GGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCGCCTG 213695
||| || || |||| ||| || | | |||||| ||||| ||| ||
Sbjct 300415 TGAC-TCAATA-ATGGCATACCACAGCTGCTGGGCCTTCACCACACGCTTG 300463
>seq20084
Length=15297
Score = 89.7 bits (98), Expect = 1e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214
||||| |||||||| || |||||||||| || || ||||| | || | | ||
Sbjct 12703 TCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCTTC 12762
Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273
||||||||||| || ||||| || |||||||||||||| |||||||| || || || ||
Sbjct 12763 AGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGGC 12821
>seq20831
Length=293931
Score = 87.8 bits (96), Expect = 3e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 38960 CACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGT 39019
||| || ||||| |||||||| |||||||||||||| || | |||||| |||| | |
Sbjct 285106 CACTAGTTCCCATCTGTTGGCAGAGAAGAGCAGGTGCACGGTGTGGTCCTCCAAATTGCT 285165
Query 39020 CTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTCGGGGAAC 39077
|| |||| ||||| | || |||| || ||| ||||| ||||| ||||| || |||
Sbjct 285166 TTTCTTCTCTAGGTAGGCACTAATCAACTGTCCAATGGTGGTGGTCCTGTCTGGAAAC 285223
Score = 87.8 bits (96), Expect = 3e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 39070 CGGGGAACCTCATCAGCTCGGCCGGTCTCCCGCTACCTTGCAGAGCCTCCACCAGCTTTT 39129
|||| |||||||||| ||||||||| | || || | ||| |||| ||| ||||| |
Sbjct 287034 CGGGAAACCTCATCATCTCGGCCGGGCGTCCACTCATCTCCAGCGCCTGCACAAGCTTCT 287093
Query 39130 GACACTGTGTGGTCTTTCCAGCCCTGTCCACTCCTTCCAATACCACAAGAGCTCCCCTCT 39189
|||||| |||||||| || || ||||||||||||||| || | || ||||| || |
Sbjct 287094 TACACTGCGTGGTCTTCCCCGCTTTGTCCACTCCTTCCAGGACTATGAGCGCTCCTCTTT 287153
Query 39190 T 39190
|
Sbjct 287154 T 287154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931229353190400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |