Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 163 5e-35
seq20084 109 1e-18
>seq18889
Length=1054283
Score = 163 bits (180), Expect = 5e-35
Identities = 332/490 (68%), Gaps = 5/490 (1%)
Strand=Plus/Plus
Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772
||||| |||||| ||||| || || || ||| | ||||||| | ||||| || || |
Sbjct 964622 GGCCAAGTTACAGACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAA 964681
Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832
||| ||||| |||||||| |||| | | || ||| ||| | || || || ||
Sbjct 964682 GTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTT 964741
Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892
||| | ||| | || || || || ||||| | | | || | ||| | |
Sbjct 964742 GTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATACCACACCTG 964801
Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951
||| || | ||| || ||| ||| |||||| || |||||| | || || |||
Sbjct 964802 -CTGAGCCTTGACCACCCGCTTCACTCTACCCTC---CTGTTCATATCGTGTGTACAGCT 964857
Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGAC 222011
| ||||||| || || | ||| |||| || || ||| ||||||||||| |
Sbjct 964858 TCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGACACATCAAAG 964917
Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071
||||| || ||||| || || |||| |||||| ||||| |||||||| || || | |
Sbjct 964918 ACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAGA 964977
Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131
|||| |||| | || ||||||||| || |||| ||| |||| || | ||| ||||
Sbjct 964978 AGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGAAAGTCAA 965037
Query 222132 AAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCAC 222191
| | ||| |||||| ||||||| || | ||| | || || ||||| || |||||||
Sbjct 965038 ACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTATTGCCAC 965097
Query 222192 CCTGATCCAC 222201
| || |||||
Sbjct 965098 CTTGGTCCAC 965107
>seq20084
Length=15297
Score = 109 bits (120), Expect = 1e-18
Identities = 110/138 (80%), Gaps = 4/138 (3%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||| |||||||||||||||||||| ||||| ||| || ||||| ||
Sbjct 12836 GGGGAGCGTGTGGTGGCCTTTGCTGCTGTGGAGGGGATCTTCTTCTCTGGATCGTTCGCC 12777
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTT-TCCAACGAGC 25990
||||| |||||||| ||| | | | || | |||||||| ||| ||||| |||||||| |
Sbjct 12776 GCCATTTTCTGGCTGAAG-AAACGAGGCCTGATGCCCGGACTG-ACTTTCTCCAACGAAC 12719
Query 25991 TCATCAGCAGGGACGAGG 26008
| |||||| | |||||||
Sbjct 12718 TTATCAGCCGCGACGAGG 12701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928542228806400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |