Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 607 8e-169
seq25415 536 1e-147
>seq21827
Length=6214
Score = 607 bits (672), Expect = 8e-169
Identities = 703/945 (74%), Gaps = 2/945 (0%)
Strand=Plus/Plus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348
|| |||||||| ||| | |||||||| ||| || ||| |||| || | || ||||
Sbjct 5073 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTATTTATTAT 5131
Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408
||| ||| ||||||| ||||| || || || || || || || ||||| ||| |||||||
Sbjct 5132 CGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 5191
Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468
||| | || || ||||| || || |||||||| || |||| | ||| || || ||
Sbjct 5192 TCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGG 5251
Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528
| || || ||||| || |||||||| ||||| ||||||| ||| | ||||| |||||
Sbjct 5252 TTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGG 5311
Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588
|||||| |||| | ||| | ||||| | ||||| || | |||||||||||||||
Sbjct 5312 TCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGA 5371
Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648
||||||||| || ||| || || ||||| |||||||| ||||||||| || |||||
Sbjct 5372 GTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCC 5431
Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708
|||||| |||||| ||||||| ||| | ||||||| |||||||||| || |||||
Sbjct 5432 TGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGA 5491
Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768
||||||||||| || ||||| ||||| ||||||| ||| |||| ||||| ||||||||
Sbjct 5492 CGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCA 5551
Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828
||||||||| |||||||| || |||||| | || || |||||||| |||||||| || ||
Sbjct 5552 CAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCT 5611
Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888
|| || ||||||||||| | || |||||| || | | || ||||| ||||
Sbjct 5612 ATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 5671
Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948
|| ||| || | || |||| ||||||||||| || ||||| ||||| || || ||
Sbjct 5672 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGC 5731
Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008
|||||||| || ||||| || ||||||||||||||||| ||| ||||| ||| |
Sbjct 5732 TGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 5791
Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068
|| || |||||||| ||||| |||||||| || || || ||||| || || | || |
Sbjct 5792 TTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTAT 5851
Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128
|| |||||||| ||| | ||||| ||||| |||||||| || | | || | ||
Sbjct 5852 TAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCA 5911
Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188
||| || || | || |||||||| || | | ||||| || | |||||||||||
Sbjct 5912 AGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGT 5971
Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGC 9233
||||| ||| | ||||| || |||||||| || || || || ||
Sbjct 5972 TATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 536 bits (594), Expect = 1e-147
Identities = 720/999 (72%), Gaps = 2/999 (0%)
Strand=Plus/Plus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | | || || || |||||||| |||||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934
||| | || ||||| ||| ||| | || | || || ||| |||| || || || |||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGG-TGCTAATTTCCT 9993
|| || ||||| || || ||| | |||||| || | || || ||| || ||| |
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTT 544
Query 9994 TACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 10053
|| || || || || || |||||| || | | | || ||| | | |||| |||||
Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGG 604
Query 10054 TCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGT 10113
||||| | || |||||||| || ||| || | || || || ||| |||||||
Sbjct 605 CCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 664
Query 10114 GGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAG 10173
|| || ||||| || |||| |||| || || |||||||| || ||||| || || |
Sbjct 665 TGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 724
Query 10174 ATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGT 10233
|| || | | |||||||| ||||| ||||| || || || || ||||| ||||||||
Sbjct 725 ATCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGT 784
Query 10234 CAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG 10293
||| ||||| || ||||| || || |||||| |||||||||||||||| ||||| ||
Sbjct 785 TTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGG 844
Query 10294 CGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 10353
|| ||||| || || || ||| | ||||| |||| || |||||||||||||| | ||
Sbjct 845 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 904
Query 10354 TCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCA 10413
|| || |||||||||||||||||||| || |||| | || || |||| || || ||
Sbjct 905 CCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCA 964
Query 10414 CGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGC 10473
|| | || |||||||| || | | | ||||||| || ||||| || ||| ||
Sbjct 965 TGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGC 1024
Query 10474 TTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTC 10533
|||| | ||||||| ||||| || ||||| ||||| || |||||||| || |||||
Sbjct 1025 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 1084
Query 10534 CCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGT 10593
||| || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||
Sbjct 1085 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 1144
Query 10594 ACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCG 10653
||| || | ||| | |||| | || ||||| | | ||||| || || ||||| ||
Sbjct 1145 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACG 1204
Query 10654 TGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTT 10713
||| || || || || ||||| || ||| | || | |||||||| ||||||||||| ||
Sbjct 1205 TGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTT 1264
Query 10714 CTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCA 10773
||| || || ||||| || | ||||||||| ||||||| |||||||| | || ||
Sbjct 1265 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 1324
Query 10774 ACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
|| || |||| | || | ||||| || || ||||| ||
Sbjct 1325 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 1363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516311756640000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |