Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 553 2e-152
seq25415 524 1e-143
>seq21827
Length=6214
Score = 553 bits (612), Expect = 2e-152
Identities = 699/963 (73%), Gaps = 8/963 (1%)
Strand=Plus/Minus
Query 103172 GCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGA 103231
||||| || || || |||||||| ||||||||||| || ||||| |||||||||||||
Sbjct 6016 GCAGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAG 5957
Query 103232 CCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATG 103291
||| ||||||| || || |||||||| || | |||||||| |||| ||||| |
Sbjct 5956 TTAGCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 5897
Query 103292 GACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTG 103351
|| |||||||| ||||| || || | ||| || ||||| ||||||| ||| | || |||
Sbjct 5896 GATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTG 5837
Query 103352 AACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTG 103411
||||| ||||| ||||| || | |||||||||
Sbjct 5836 AACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTG 5777
Query 103412 AATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTAT 103471
|| || |||||||||||||| || || || ||||||||||| |||||||| |||||
Sbjct 5776 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAG 5717
Query 103472 GTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCA 103531
|| ||||||||||| ||||| ||||||| | || ||||||| |||| || || ||
Sbjct 5716 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 5657
Query 103532 C-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAA 103590
| || | | | || | || |||| ||||| |||||||||||||| || || || |||||
Sbjct 5656 CTGATCAAACTAGAAGTTACCAAG-GAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 5598
Query 103591 GACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAA 103650
|| ||||| ||||| | |||||| || |||||||| || ||||| || || ||||||||
Sbjct 5597 TACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAA 5538
Query 103651 GACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAACC 103710
|| | |||| ||||||| || || || || || | ||||||| | || || || ||
Sbjct 5537 TACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCC 5478
Query 103711 TTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGC 103770
|||||||| || |||| |||||| || || | ||||| ||||||||||| || |||||
Sbjct 5477 TTGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 5418
Query 103771 GACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATATA 103830
||| ||||| |||||||| ||||||||| | | |||||||||||| ||||||||
Sbjct 5417 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 5358
Query 103831 TGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACAG 103890
| | |||| | ||||| | || | || | |||||||||| || || |
Sbjct 5357 ACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAA 5298
Query 103891 CCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGA 103950
||| ||||||| || || |||||||| || || || || || | ||| || || || |
Sbjct 5297 CCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTAT--CGCTGCA 5240
Query 103951 GGAG--GGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACG 104008
| || |||| || |||||||| || || ||||| || || | || || |||| ||
Sbjct 5239 GAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACA 5180
Query 104009 GGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCA 104067
||||||||||| || || ||||| || ||||| || || | |||||| | || || ||
Sbjct 5179 GGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACA 5120
Query 104068 GATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACG 104127
|| ||||| | ||| | || |||||||||| ||||| ||||| |||| || |||||
Sbjct 5119 GA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACG 5061
Query 104128 GTT 104130
|||
Sbjct 5060 GTT 5058
>seq25415
Length=1491
Score = 524 bits (580), Expect = 1e-143
Identities = 726/1014 (72%), Gaps = 2/1014 (0%)
Strand=Plus/Minus
Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769
|||||||| || | || | ||||| ||||| |||| || ||||||||| || |||||
Sbjct 1378 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 1319
Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829
| |||| ||| ||||| | |||||| || || || || || || |||||||| |||
Sbjct 1318 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTC 1259
Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889
|| || || |||||||| ||||| | ||| || || || || |||||||| ||||| ||
Sbjct 1258 TCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGTAGA 1199
Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949
|| || || ||||| | | || | | ||| |||| | ||| | || || |||||
Sbjct 1198 TTCAGGGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 1139
Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009
| |||||||||||| ||||| | ||||| ||| |||| ||||||||||| |||||
Sbjct 1138 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 1079
Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069
|| ||||| || || |||||||||||||| ||||| |||| || | | || || |
Sbjct 1078 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCCCGG 1019
Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129
|| || ||||| ||||||||||||| | | ||| || || || || |||| || ||
Sbjct 1018 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATA 959
Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189
|| | ||||| || | |||| | || ||||| ||||||||||| |||||||| |
Sbjct 958 GCGCATAGCAGAGCAGCGCCCAATACCCCAGCAACTCCCATCATATGAAATGGGTTCAAT 899
Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249
||||| ||||| || || || | ||||| | ||||| |||||| || || ||||||||
Sbjct 898 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 839
Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309
|||||||||||||||| ||||| || || ||||| || || || ||| ||||||
Sbjct 838 CTTGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAGGAATACAGAAACAAAA 779
Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369
|| || || || || ||||| || || ||||| || || || | | || | | |||
Sbjct 778 ACCGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGTAATTGAACAGATCGAGCA 719
Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429
| || |||||||| | ||||||||| || || | || || ||||| ||||| ||||||
Sbjct 718 AGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGAAGAGCAACAAAA 659
Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489
| ||| || || || | ||| ||| | ||||||||||| |||||||| |||||
Sbjct 658 GTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGGCCCCAT 599
Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549
|||| | | ||| || | | | | |||||| || || || || || || | |||
Sbjct 598 AGTAACAACAAAGAGTGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCGGTTAAGAAG 539
Query 102550 TTAGCA-CCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGT 102608
|| ||| ||||| | || | || | || ||||||||||| ||||| |||| ||
Sbjct 538 TT-GCAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTACAAAGGT 480
Query 102609 CGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGA 102668
|| || |||| ||| ||||| | |||| ||| ||| ||||| || | ||| || ||
Sbjct 479 TGTACCTGTAAACCAACCCCCTACGGCGAAATAGGCACAAGGAAAGAGCAATAGACCGGA 420
Query 102669 CCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722
|||||| ||||| || || || || | | ||||||||||| || |||||
Sbjct 419 CCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633307232944800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |