Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_020838.1
Length=45728
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 497 3e-136
>seq21827
Length=6214
Score = 497 bits (550), Expect = 3e-136
Identities = 702/984 (71%), Gaps = 2/984 (0%)
Strand=Plus/Minus
Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530
|| || || || |||||||| || ||||| || |||||||| || || | || | |||
Sbjct 6013 GCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAGTTA 5954
Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590
|||||||| | ||| ||||||||||| || || || | || | | | | | | ||||
Sbjct 5953 GCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5894
Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650
||||| || ||||||||||| ||||| |||||||| || | || | |||| |||
Sbjct 5893 TGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 5834
Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710
||||||||||| |||||||| ||||| || ||||| || | | ||| || || || ||
Sbjct 5833 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 5774
Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770
||||||||||||||||| | || |||||||| || |||||||| || |||||||| ||
Sbjct 5773 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAGGTT 5714
Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830
|||||||||||||| || ||||||| | || || | | ||| || || || |
Sbjct 5713 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 5654
Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890
|| | || || |||| | ||| ||||||||| ||| | || || |||||
Sbjct 5653 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 5594
Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950
|| || || || | ||||||||| || |||||||| || ||||||||||| ||||| ||
Sbjct 5593 CCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 5534
Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010
| |||| ||||||| || || || || || | |||||| | |||||||| || ||
Sbjct 5533 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 5474
Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070
|||| ||||| | | ||| |||||||| ||||| || |||||||| || || ||||||
Sbjct 5473 CCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 5414
Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130
||||| || | ||| || || || | |||||||||||||| || ||||| ||| |
Sbjct 5413 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 5354
Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190
|| |||| | ||||| | || | || | | ||||| || ||||| | ||||
Sbjct 5353 GCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 5294
Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250
||||||| | ||| |||||||| || ||||| || || | || || || | |
Sbjct 5293 TCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGAAGTA 5234
Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310
|||| | ||| || || || || ||||| ||||| | || || |||| || |||||
Sbjct 5233 GGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 5174
Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370
|| || ||||| || || || || || || ||| || ||||||||||| || ||
Sbjct 5173 CGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 5114
Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATT 22429
|||| ||| ||| | ||| |||| | || || |||||||| | ||||||||||| |
Sbjct 5113 GCGGTCAATAAGGTAGGGA-TCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 5055
Query 22430 AGTAGAGGTGACCCAGGAACAAAA 22453
||| ||| | |||| ||| ||
Sbjct 5054 AGTGCTGGTTATCCAGTTACAGAA 5031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146162754106800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |