Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 518 4e-142
seq25415 389 5e-103
>seq21827
Length=6214
Score = 518 bits (574), Expect = 4e-142
Identities = 707/984 (72%), Gaps = 2/984 (0%)
Strand=Plus/Minus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108
||||| ||||| |||||||| || || || | |||||||||||||||||||||||||||
Sbjct 6013 GCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAGTTA 5954
Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168
|| | ||| | || |||| |||| || | | || | | |||||| || |||
Sbjct 5953 GCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5894
Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228
||||| || ||||||||||| ||||| || ||||| |||| ||||| | || || |||
Sbjct 5893 TGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 5834
Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288
|| | || ||| ||||| || | |||||||||||||| | | | |||||||||||
Sbjct 5833 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 5774
Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348
|||||| |||||||| | || ||||| ||||| || || ||||| || ||||| |||
Sbjct 5773 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAGGTT 5714
Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408
||||| ||||| ||||| | ||||| | || || || | ||||| ||||| |||
Sbjct 5713 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 5654
Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468
|| | | ||| || || | ||||||||||| || ||||| || || ||||| |
Sbjct 5653 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 5594
Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528
|| ||||| ||| |||||| || || ||||| || ||||| ||||| |||||||| ||
Sbjct 5593 CCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 5534
Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588
| ||| |||||||||||||| ||||| || || |||||||| ||||| || || |||
Sbjct 5533 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 5474
Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648
|||| ||| || | ||||| ||||| ||||| | || || |||||||| ||||||
Sbjct 5473 CCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 5414
Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708
|||||||| ||||| || | | | | |||||||||| | ||||| ||
Sbjct 5413 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 5354
Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768
| | ||||| | ||||| | || | | || ||||||||||||||| || ||||||
Sbjct 5353 GCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 5294
Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828
|||||||| | || |||||||| || ||||| || || | || || || || |
Sbjct 5293 TCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGAAGTA 5234
Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888
|||| || |||||||| || || ||||| ||||| | | ||| || | || |||||
Sbjct 5233 GGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 5174
Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGC 124947
| || || || ||||| || ||||| || ||||| || || | || || ||| | |
Sbjct 5173 CGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAGT 5115
Query 124948 TGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTT 125007
||| || | |||| || ||||| | |||||||||||| |||| |||| | ||| |
Sbjct 5114 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 5055
Query 125008 TGTTGATGTTACCCACTCACAGAA 125031
|| |||| ||| | ||||||
Sbjct 5054 AGTGCTGGTTATCCAGTTACAGAA 5031
>seq25415
Length=1491
Score = 389 bits (430), Expect = 5e-103
Identities = 711/1039 (68%), Gaps = 23/1039 (2%)
Strand=Plus/Minus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | |||| || || || ||||||| || || ||||| || ||
Sbjct 1382 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 1323
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | ||||| || || || |||||
Sbjct 1322 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAA 1263
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || || || ||||| ||||| | || || ||||| || ||||| || || |
Sbjct 1262 AGTCTCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACG 1203
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
|| || || |||||||| || | || | || |||| | ||| | || || ||
Sbjct 1202 TAGATTCAGGGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 1143
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || ||
Sbjct 1142 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 1083
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || | ||| || || | ||| |||||||||||| | || || || | || ||
Sbjct 1082 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 1023
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| |||| ||| | || ||| || ||||| | || ||
Sbjct 1022 CCGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 984
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
|| | || || ||||||||||| || ||||| | || | || | || || |||||
Sbjct 983 ATTTTCTACGGTAGCACCATGAATAGCGCATAGCAGAGCAGCGCCCAATACCCCAGCAAC 924
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
|||||||| |||||||| |||||||| || || || ||||| | || | ||| |
Sbjct 923 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 864
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||||| || || || ||||| || ||| || |||||||||| ||||||||| ||
Sbjct 863 TCGAAATATAGCCGCTACACCAAAACTTGGCGCAAAGAACCAACCAGACTGACCTAGCGG 804
Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525
||| ||||| || | | || || || || | | |||||||||| ||| || ||
Sbjct 803 ATAAATCAGGAATACAGAAACAAAAACCGCAATTGGACCGGAGAATGCGATTGCATTATA 744
Query 123526 AGGTC-TAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTC 123584
||||| |||| ||| || || | |||||||| | | |||||||||||| ||||
Sbjct 743 AGGTCGTAATTGA-ACAGATCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTC 685
Query 123585 CAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGA 123644
| || | || || | || ||||| |||| ||||| || | ||| |||||||| |
Sbjct 684 CGAAAGCGCCGTGAAGAGCAACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAA 625
Query 123645 ATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAG 123704
| ||||||||||||||| ||||| || |||| | | || | | | | |||
Sbjct 624 AATCTCCTTGTGCTTCAGGGCCCCATAGTAACAACAAAGAGTGTGCTAAACTATTAGCAG 565
Query 123705 GTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCAT 123764
| || || ||||| || ||||||||||| || || | ||| ||| ||| | ||||
Sbjct 564 GAGTAGAAACTGCGGCGGTTAAGAAGTTGCAGCCTTCCAAATAGGAACTTGCTAATCCAT 505
Query 123765 GTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACG 123824
| ||||||||||| || || ||||| || ||| |||||||| || | | | ||| |
Sbjct 504 GGGTATACCATGAAGTTACAAAGGTTGTACCTGTAAACCAACCCCCTACGGCGAAATAGG 445
Query 123825 CACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACC 123884
||||||| | || || ||||| ||||| |||| || || ||||| || ||| |||||
Sbjct 444 CACAAGGAAAGAGCAATAGACCGGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACC 385
Query 123885 AGTCGTCAAGAACATCAAA 123903
|||| || | || ||||||
Sbjct 384 AGTCATCCATAATATCAAA 366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578809791271200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |