Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 587 1e-162
seq25415 509 2e-139
>seq21827
Length=6214
Score = 587 bits (650), Expect = 1e-162
Identities = 726/988 (73%), Gaps = 4/988 (0%)
Strand=Plus/Minus
Query 26731 GCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTA-ATCCAAG 26789
||||| ||||| | || || ||||| ||||| | ||| || || || || | | |||||
Sbjct 6016 GCAGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAG 5957
Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849
||||||||||| || || ||||| || || | |||||||| || ||||| ||
Sbjct 5956 TT-AGCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTAC 5898
Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909
||| || ||||| |||||||| || | || |||||||| ||| | ||| | || ||
Sbjct 5897 AGATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGT 5838
Query 26910 GAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTT 26969
|||||| || || || || ||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct 5837 GAACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTT 5778
Query 26970 GAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTA 27029
||| |||||||||||||||||| || || || || ||||| || || ||||| |||||
Sbjct 5777 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTA 5718
Query 27030 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTC 27089
||| ||||| ||||||||||| | ||||| | || || ||| |||| || || ||
Sbjct 5717 GGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 5658
Query 27090 ACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAA 27149
| || | ||| || |||| || ||||||||| ||| || || || |||||
Sbjct 5657 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 5598
Query 27150 TACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAA 27209
||| ||||| || || | |||||| || |||||||||||||| ||||| || || |||||
Sbjct 5597 TACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAA 5538
Query 27210 TACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACC 27269
||||| |||| |||| |||||||||||||| || ||||||||| | || || || ||
Sbjct 5537 TACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCC 5478
Query 27270 TTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGC 27329
|||||| | ||||||| | ||| || ||| | ||||| || || ||||| ||||||||
Sbjct 5477 TTGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 5418
Query 27330 TACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATA 27389
||| ||||| || |||||||| | ||| | |||||||||||||| ||||||||
Sbjct 5417 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 5358
Query 27390 AGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAA 27449
| | | || | | ||||| | || | || | |||||||||| || || ||
Sbjct 5357 ACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAA 5298
Query 27450 CCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGA 27509
||| ||||| | || || |||||||| || ||||| || || | ||| || || ||
Sbjct 5297 CCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGA 5238
Query 27510 ACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGG 27569
| | || | || ||||||||||| || ||||| ||||| | || || |||| ||| ||
Sbjct 5237 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGG 5178
Query 27570 TTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGA 27628
|||||||||||| |||||||| || || || || || ||||| |||| ||| || ||||
Sbjct 5177 TTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA 5118
Query 27629 CAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGT 27688
|||||| | || | || |||||||||| ||||| ||||| |||| || | |||||
Sbjct 5117 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGT 5059
Query 27689 TGTTAGTTGATGTCACCCACTCACAGAA 27716
| | ||| || | ||| | ||||||
Sbjct 5058 TTTCAGTGCTGGTTATCCAGTTACAGAA 5031
>seq25415
Length=1491
Score = 509 bits (564), Expect = 2e-139
Identities = 728/1020 (71%), Gaps = 4/1020 (0%)
Strand=Plus/Minus
Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445
|| ||||||| || || | || || | |||||| | || |||||| || || |
Sbjct 1383 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 1324
Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505
| || || | |||||| |||| | || | ||| || | ||||||||| |||||||
Sbjct 1323 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 1264
Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565
| |||||| | |||||| || ||||| || || ||| || || ||||| ||||
Sbjct 1263 AAGTCTCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCAC 1204
Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625
| ||||| || || || || | | |||| || | | ||| | ||| | || || |
Sbjct 1203 GTAGATTCAGGGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 1144
Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685
|||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||| |
Sbjct 1143 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 1084
Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745
||||||| || || || || ||||| ||||| || || || | ||||| | | || |
Sbjct 1083 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 1024
Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805
| || || ||||| || ||||||||| | | ||||| || || ||| | ||||
Sbjct 1023 CCCGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCAT 964
Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865
||||||| | || || || | |||| || |||||||||||||||||||| || ||||
Sbjct 963 GAATAGCGCATAGCAGAGCAGCGCCCAATACCCCAGCAACTCCCATCATATGAAATGGGT 904
Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925
| | ||||| |||||||| || |||| ||||| | ||| | || || ||||| ||||
Sbjct 903 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 844
Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985
| ||||| ||||||||||||||| ||||| || | ||||| || ||||||||||| |
Sbjct 843 CAAAACTTGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAGGAATACAGAAA 784
Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044
| || || ||||| ||||| || || || || ||||| || || || | | || |||
Sbjct 783 CAAAAACCGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGTAATTGAAC-AGAT 725
Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104
|| || |||||||| ||||||||||| |||||||| ||| | || || ||||| ||||||
Sbjct 724 CGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGAAGAGCA 665
Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164
||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||
Sbjct 664 ACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGG 605
Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224
||||| |||| | | ||| || | | | | |||||| || || || || || ||
Sbjct 604 CCCCATAGTAACAACAAAGAGTGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCGGTT 545
Query 24225 AGAAAGTTAGCA-CCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAAC 24283
| ||||| ||| || || | ||||||||| || | ||||||||| ||||| || ||
Sbjct 544 AAGAAGTT-GCAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTAC 486
Query 24284 AAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAG 24343
||| | ||| || |||| |||||| || | ||| | ||| ||| |||| || | ||
Sbjct 485 AAAGGTTGTACCTGTAAACCAACCCCCTACGGCGAAATAGGCACAAGGAAAGAGCAATAG 426
Query 24344 TCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403
|| |||||||| ||||| || || || |||| | |||||| |||| || |||||
Sbjct 425 ACCGGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665277615199200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |