Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq18889 257 2e-63 seq19222 86.0 7e-12 >seq18889 Length=1054283 Score = 257 bits (284), Expect = 2e-63 Identities = 940/1442 (65%), Gaps = 50/1442 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| ||||| | || || |||| |||||| || || ||| | | Sbjct 965465 CCCACAGCACATGCTCATGAGAGTAGCTGTCGGAATCCACAACTCTGATATAGATGCAGC 965406 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | ||||| ||| || | |||| | | || ||||| ||| || | || || || | Sbjct 965405 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 965347 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || || || ||||| ||| | ||||| |||||||| | |||| ||||| | Sbjct 965346 TCAACGCAGGCACTAACAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGATG 965287 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | || || |||| || || | | ||||| | ||||| || | || | Sbjct 965286 ACAGCATTGATGGCATTTATGACACACTGAAACAATGTGCTCTTATCTCTAAATCTGCAG 965227 Query 75450 GGGGTATTGGGAT-GCACATCCATGATGTGAGAGC--CAATAAATCTCGTATTCGGGGGA 75506 | || ||||| | ||| | || | | ||| | || || | | ||| || | Sbjct 965226 GAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATCAACAGGAAGTTAC--ATTGCTGGAA 965170 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 |||||||| | ||| ||||| || | || ||||| | || | ||| ||| || |||| Sbjct 965169 CAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGAGAGTGTACAACAACACTGCACGCT 965110 Query 75567 ATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 |||| | |||| || | || ||| || | || | |||||||| ||||||| Sbjct 965109 ATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCTTTGCCATTTACTTGGAGCCATGGC 965050 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 | ||| | | || || |||||| | | || ||| ||| | || ||| || Sbjct 965049 ACTTTGATGTGTTTGACTTTCTTGAGCTGAAGAAG-AACACTGGTAAAGAGGAGCAGAGG 964991 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 |||| ||||| | |||| ||||| || ||||| ||||||||| | || || | Sbjct 964990 GCGCGAGACCTCTTCTATGCCCTATGGATCCCTGACCTGTTCATGAAGAGAGTGGAAAAC 964931 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 | |||||| | | ||||| || | || | ||| | || | | |||| Sbjct 964930 AACCAGGACTGGTCTTTGATGTGTCCCAGTGAGTGCCCTGGGT-TGGATGA-GTGTTGGG 964873 Query 75802 TG-AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 | |||||||||| || |||||| |||||| |||||||||||| || ||| || Sbjct 964872 GGGAGGAGTTTGAGAAGCTGTACACACGATATGAACAGGAGGGTAGAGTGAA-GCGGGTG 964814 Query 75861 TACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 | || | | | | || ||| | || || | | || ||||| || || |||||||| Sbjct 964813 GTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACAGAAACGGGAACACCT 964754 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 || ||| | ||||| ||||| ||||||| |||||||||||| |||||||||| || ||| Sbjct 964753 TACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCATC 964694 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039 || || || | ||||| || ||| | ||||| ||| || ||||| || || Sbjct 964693 AAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTAGCCGTC 964634 Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGAT 76099 || || ||||| ||||| || || | |||||| | | ||| ||||| |||||| Sbjct 964633 TGTAACTTGGCCTCAATTGCTCTCAACATGTATGTTACTCCAGA---ACGCACCTTTGAT 964577 Query 76100 TATGAAAAACTTCATGAAATCAC-AAAG--ATTGTTACCAAAAATCTAAACCGAGTCATT 76156 | |||| ||| | |||| |||| ||||| | |||||| || ||||| Sbjct 964576 TTCAAAAAGCTTGCCTCAGTCACTAAAGTAATTGT---AAGAAATCTCAATAAGATCATT 964520 Query 76157 GACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 |||| || | || || || ||| | | | || || || | ||| ||||| || Sbjct 964519 GACATTAACTACTACCCAGTTCCTGAAGCAGAG---AATTCAAACAAGCGCCACAGGCCA 964463 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGA- 76272 ||||| | ||||| || ||||| || |||| || || | || || ||||||| Sbjct 964462 ATTGGGATCGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGAA 964403 Query 76273 --TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 ||| ||||||| || | ||||| | |||||||||||||| || | || || Sbjct 964402 AGTTC---TGAAGCCCAGCTGCTGAATATCCAGATCTTTGAAACCATCTACTATGCTGCC 964346 Query 76331 CTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390 |||||||| || || || ||||| ||| | || | |||||||||| || || Sbjct 964345 CTGGAGGCAAGCTGCGAGTTGGCAGAAAAGGACGGGCCTTATGAGACATACCCAGG--CT 964288 Query 76391 CCCGCGTCCCAAGGGG--TGCTTCAGTTTGATATGTGGG--AAGGTG-AAACCAAGCTCA 76445 ||| || ||||| | || || | || ||||||| |||||| || |||| Sbjct 964287 CCCCAGTGAGTAGGGGCATTCTGCAATACGACATGTGGGAAAAGGTGCCCACTGAGCT-- 964230 Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 || |||||| | | || ||||| || | | ||| | | ||||| || | Sbjct 964229 -CTGGGACTGGAAGCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGGAACAGCCTGT 964171 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 || |||| || ||||| ||||||||||| || ||||| | || || ||||| | | | | Sbjct 964170 TGTTGGCCCCTATGCCCACAGCCTCCACAGCGCAAATACTTGGCAACAATGAGTCCATCG 964111 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 || | ||||| | ||||||||| | ||| ||| | || |||||| ||||| | Sbjct 964110 AAGCCTACACCAGCAACATCTACACACGCAGAGTCCTGTCTGGAGAGTTTCAGATTGTAA 964051 Query 76626 AC 76627 || Sbjct 964050 AC 964049 >seq19222 Length=928746 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/123 (78%), Gaps = 4/123 (3%) Strand=Plus/Plus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTT 65147 || ||||| ||| ||||| || |||||||| || || || ||| || ||||||||| | Sbjct 773775 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTT-TGCTGCCATTTATTGGCT 773833 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT-CAAATGAACTTATTTCCCGAGATG 65206 ||| ||| ||||||| ||||| ||||| | ||| | | ||||||||||| | |||||| Sbjct 773834 GAAAAAGAGGGGTCTAATGCCTGGCCT-TACTTATTCCAATGAACTTATCAGCAGAGATG 773892 Query 65207 AGG 65209 ||| Sbjct 773893 AGG 773895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596375267452800