Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 257 2e-63
seq19222 86.0 7e-12
>seq18889
Length=1054283
Score = 257 bits (284), Expect = 2e-63
Identities = 940/1442 (65%), Gaps = 50/1442 (3%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||||||| ||||| ||||| | || || |||| |||||| || || ||| | |
Sbjct 965465 CCCACAGCACATGCTCATGAGAGTAGCTGTCGGAATCCACAACTCTGATATAGATGCAGC 965406
Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| ||| || | |||| | | || ||||| ||| || | || || || |
Sbjct 965405 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 965347
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || || || ||||| ||| | ||||| |||||||| | |||| ||||| |
Sbjct 965346 TCAACGCAGGCACTAACAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGATG 965287
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| || | || || |||| || || | | ||||| | ||||| || | || |
Sbjct 965286 ACAGCATTGATGGCATTTATGACACACTGAAACAATGTGCTCTTATCTCTAAATCTGCAG 965227
Query 75450 GGGGTATTGGGAT-GCACATCCATGATGTGAGAGC--CAATAAATCTCGTATTCGGGGGA 75506
| || ||||| | ||| | || | | ||| | || || | | ||| || |
Sbjct 965226 GAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATCAACAGGAAGTTAC--ATTGCTGGAA 965170
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
|||||||| | ||| ||||| || | || ||||| | || | ||| ||| || ||||
Sbjct 965169 CAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGAGAGTGTACAACAACACTGCACGCT 965110
Query 75567 ATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623
|||| | |||| || | || ||| || | || | |||||||| |||||||
Sbjct 965109 ATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCTTTGCCATTTACTTGGAGCCATGGC 965050
Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
| ||| | | || || |||||| | | || ||| ||| | || ||| ||
Sbjct 965049 ACTTTGATGTGTTTGACTTTCTTGAGCTGAAGAAG-AACACTGGTAAAGAGGAGCAGAGG 964991
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
|||| ||||| | |||| ||||| || ||||| ||||||||| | || || |
Sbjct 964990 GCGCGAGACCTCTTCTATGCCCTATGGATCCCTGACCTGTTCATGAAGAGAGTGGAAAAC 964931
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
| |||||| | | ||||| || | || | ||| | || | | ||||
Sbjct 964930 AACCAGGACTGGTCTTTGATGTGTCCCAGTGAGTGCCCTGGGT-TGGATGA-GTGTTGGG 964873
Query 75802 TG-AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860
| |||||||||| || |||||| |||||| |||||||||||| || ||| ||
Sbjct 964872 GGGAGGAGTTTGAGAAGCTGTACACACGATATGAACAGGAGGGTAGAGTGAA-GCGGGTG 964814
Query 75861 TACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919
| || | | | | || ||| | || || | | || ||||| || || ||||||||
Sbjct 964813 GTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACAGAAACGGGAACACCT 964754
Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979
|| ||| | ||||| ||||| ||||||| |||||||||||| |||||||||| || |||
Sbjct 964753 TACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCATC 964694
Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039
|| || || | ||||| || ||| | ||||| ||| || ||||| || ||
Sbjct 964693 AAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTAGCCGTC 964634
Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGAT 76099
|| || ||||| ||||| || || | |||||| | | ||| ||||| ||||||
Sbjct 964633 TGTAACTTGGCCTCAATTGCTCTCAACATGTATGTTACTCCAGA---ACGCACCTTTGAT 964577
Query 76100 TATGAAAAACTTCATGAAATCAC-AAAG--ATTGTTACCAAAAATCTAAACCGAGTCATT 76156
| |||| ||| | |||| |||| ||||| | |||||| || |||||
Sbjct 964576 TTCAAAAAGCTTGCCTCAGTCACTAAAGTAATTGT---AAGAAATCTCAATAAGATCATT 964520
Query 76157 GACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213
|||| || | || || || ||| | | | || || || | ||| ||||| ||
Sbjct 964519 GACATTAACTACTACCCAGTTCCTGAAGCAGAG---AATTCAAACAAGCGCCACAGGCCA 964463
Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGA- 76272
||||| | ||||| || ||||| || |||| || || | || || |||||||
Sbjct 964462 ATTGGGATCGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGAA 964403
Query 76273 --TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330
||| ||||||| || | ||||| | |||||||||||||| || | || ||
Sbjct 964402 AGTTC---TGAAGCCCAGCTGCTGAATATCCAGATCTTTGAAACCATCTACTATGCTGCC 964346
Query 76331 CTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390
|||||||| || || || ||||| ||| | || | |||||||||| || ||
Sbjct 964345 CTGGAGGCAAGCTGCGAGTTGGCAGAAAAGGACGGGCCTTATGAGACATACCCAGG--CT 964288
Query 76391 CCCGCGTCCCAAGGGG--TGCTTCAGTTTGATATGTGGG--AAGGTG-AAACCAAGCTCA 76445
||| || ||||| | || || | || ||||||| |||||| || ||||
Sbjct 964287 CCCCAGTGAGTAGGGGCATTCTGCAATACGACATGTGGGAAAAGGTGCCCACTGAGCT-- 964230
Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505
|| |||||| | | || ||||| || | | ||| | | ||||| || |
Sbjct 964229 -CTGGGACTGGAAGCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGGAACAGCCTGT 964171
Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565
|| |||| || ||||| ||||||||||| || ||||| | || || ||||| | | | |
Sbjct 964170 TGTTGGCCCCTATGCCCACAGCCTCCACAGCGCAAATACTTGGCAACAATGAGTCCATCG 964111
Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625
|| | ||||| | ||||||||| | ||| ||| | || |||||| ||||| |
Sbjct 964110 AAGCCTACACCAGCAACATCTACACACGCAGAGTCCTGTCTGGAGAGTTTCAGATTGTAA 964051
Query 76626 AC 76627
||
Sbjct 964050 AC 964049
>seq19222
Length=928746
Score = 86.0 bits (94), Expect = 7e-12
Identities = 96/123 (78%), Gaps = 4/123 (3%)
Strand=Plus/Plus
Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTT 65147
|| ||||| ||| ||||| || |||||||| || || || ||| || ||||||||| |
Sbjct 773775 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTT-TGCTGCCATTTATTGGCT 773833
Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT-CAAATGAACTTATTTCCCGAGATG 65206
||| ||| ||||||| ||||| ||||| | ||| | | ||||||||||| | ||||||
Sbjct 773834 GAAAAAGAGGGGTCTAATGCCTGGCCT-TACTTATTCCAATGAACTTATCAGCAGAGATG 773892
Query 65207 AGG 65209
|||
Sbjct 773893 AGG 773895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596375267452800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |