Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 527 8e-145
>seq21827
Length=6214
Score = 527 bits (584), Expect = 8e-145
Identities = 706/977 (72%), Gaps = 6/977 (1%)
Strand=Plus/Minus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
|||| |||| |||||||| || || || | ||||||||||||||||||||| |||||
Sbjct 6013 GCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAGTTA 5954
Query 7951 GCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008
|| | ||| ||||| ||| |||| ||| ||| | ||| | | |||||| || |
Sbjct 5953 GCACGGTTGATAATA--TCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAG 5896
Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTA 8068
||||||| || || || || || | |||||| ||||| |||| |||||| | || ||| |
Sbjct 5895 ATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTGA 5836
Query 8069 ACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTT-A 8127
|||||| || ||| || || | | ||| ||||||||||| | | | | |||||| |
Sbjct 5835 ACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGA 5776
Query 8128 AACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAG 8187
||| | ||||| |||||||| |||| ||||| || ||||||||||| || ||||| |||
Sbjct 5775 AACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAG 5717
Query 8188 GTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCT 8247
|| ||||| |||||||| || | ||||| | || ||| || | ||| || || ||
Sbjct 5716 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 5657
Query 8248 CTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAAC 8307
||||| | | ||| || || || ||||| |||||||||||||| || || || |||||
Sbjct 5656 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 5597
Query 8308 ATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAAT 8367
| ||| ||||| ||| ||| || || || |||||||| ||||| ||||| |||||||||
Sbjct 5596 ACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAAT 5537
Query 8368 ACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCC 8427
|| | ||||||||| || |||||||| || ||||||||||| || ||||| || ||
Sbjct 5536 ACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCT 5477
Query 8428 TGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCT 8487
||||||| |||||| | ||||| || || |||||| | || ||||| ||||||
Sbjct 5476 TGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 5417
Query 8488 ACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAA 8547
||| ||||| || | |||||| | ||| | | ||||||| | |||||| |||
Sbjct 5416 ACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAA 5357
Query 8548 GCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAAC 8607
|| | |||| | ||||| | | || | || ||| ||||| || || || |||
Sbjct 5356 CAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 5297
Query 8608 CACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAA 8667
|| ||||| | | || |||||||| || || || || || || || || || |||
Sbjct 5296 CATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGAA 5237
Query 8668 GATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGT 8727
| |||| | |||||||| || || ||||||||||| | | || || | |||||||
Sbjct 5236 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGT 5177
Query 8728 TCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTA 8787
||||||||||| || ||||| || || || |||||||| || || | ||||| || |
Sbjct 5176 TCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAA 5117
Query 8788 GCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTG 8847
| || | || ||| ||| ||||| | ||| |||||||| || | ||||| | |||
Sbjct 5116 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTT 5057
Query 8848 TTTGTACTTGTAACCCA 8864
| || || || | |||
Sbjct 5056 TCAGTGCTGGTTATCCA 5040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615661782823200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |