Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 589 6e-164
>seq21827
Length=6214
Score = 589 bits (652), Expect = 6e-164
Identities = 740/1008 (73%), Gaps = 6/1008 (1%)
Strand=Plus/Plus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||||||| | || ||| | ||||||||||| |||| ||||||
Sbjct 5022 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 5081
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397
||||| ||||||| |||| || | | | || || | ||| |||||| |||||||||
Sbjct 5082 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCA 5139
Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457
||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| || |
Sbjct 5140 TTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTT 5199
Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517
|||| ||||| || || ||||||||| | | |||| | || || || | ||||
Sbjct 5200 ATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATT 5259
Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577
| || |||| |||||||| | || |||| |||||| | |||||||| || ||||||
Sbjct 5260 TTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATG 5319
Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637
|||| | || | ||||| | | ||| | | ||| |||| || || |||||||
Sbjct 5320 AGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 5379
Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697
|| | ||| || || ||| | || ||||| |||||| || || || ||||| || |
Sbjct 5380 TTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 5439
Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757
| || ||||| || ||| | |||||||| |||| ||||| ||||| || || ||||
Sbjct 5440 CTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGC 5499
Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817
|||| || || || ||||| |||||||||||| | || ||||| ||||| || ||||| |
Sbjct 5500 CTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCC 5559
Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877
||||||| || || || ||| | || || || || ||||| || || || | ||| |
Sbjct 5560 TTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 5619
Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937
||||||||||| | || || ||| | | | | ||||| || ||||| |||
Sbjct 5620 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 5679
Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997
||| | || |||| |||||||||||||| || || || || || || || || ||||
Sbjct 5680 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATG 5739
Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056
|||| ||||| || | |||||||||||||| | |||| || || ||| ||||| |||
Sbjct 5740 GTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACAC 5798
Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116
||||| || || |||||||| || || || |||||||||||| || | || | || |||
Sbjct 5799 TTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACT 5858
Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176
||||| |||||||| |||||||| || || |||||||| | ||||||| ||| || |
Sbjct 5859 ATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGT 5918
Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236
|| || ||| |||||||||||| | || ||||| ||| | || | || || |||||
Sbjct 5919 GTAATTAATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCAT 5978
Query 43237 GAGCGGAATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGAGGTT 43284
|| || || || ||||||||||| || ||||| || | || || |||
Sbjct 5979 GAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGCGGTCGAAGTT 6026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143488381980880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |