Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq21827 553 2e-152 >seq21827 Length=6214 Score = 553 bits (612), Expect = 2e-152 Identities = 706/970 (73%), Gaps = 12/970 (1%) Strand=Plus/Plus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || | || ||||| |||||| | ||||||||| | | | | | Sbjct 5053 CTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCG 5112 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| |||| ||||||||||| ||||| ||||| ||||||||||||| Sbjct 5113 CAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTC 5172 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || |||| ||| || | ||||| ||||| || || |||||||| || | | Sbjct 5173 GTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTC 5232 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || || ||| | || || || || || |||||||| || | |||||| Sbjct 5233 CTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATG 5292 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| |||||||||||||||| | || | || | ||||| | | || | Sbjct 5293 AATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGT-- 5350 Query 155291 CAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGA 155347 ||| | | | |||||| ||||||||||| || |||||| || ||||| ||||||| Sbjct 5351 -AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGA 5409 Query 155348 TCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTT 155407 | ||||||||| || || || || | ||||| ||||| ||| | | ||||| Sbjct 5410 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAA 5469 Query 155408 TCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 155467 | |||||||| || ||||| | |||||||| || |||||||||||||| |||| | Sbjct 5470 TTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCA 5529 Query 155468 TGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAG 155527 || | || |||||||| || ||||| |||||||||||||| || |||||| | || |||| Sbjct 5530 TGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAG 5589 Query 155528 CAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCAC 155587 | ||||| ||||| || || || ||| ||||||||| ||||| ||||| || ||| Sbjct 5590 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTT 5649 Query 155588 TAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAG 155647 | ||| | ||||| || || | || ||| || | ||||||| ||||| ||||| | Sbjct 5650 TGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGG 5709 Query 155648 AAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATG 155707 ||||||| || || || || ||||||||||| || || || || | |||||||| |||| Sbjct 5710 AAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATG 5769 Query 155708 CATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCA 155767 | ||||||||||| | | | ||||||||||| ||||| |||||||| || | | Sbjct 5770 CTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTA 5829 Query 155768 TCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCA 155827 | ||| |||||| | ||| | || ||||| || ||| | || |||||||| |||| Sbjct 5830 TTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCA 5889 Query 155828 ACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTA 155884 |||| |||||||| || |||| ||| || || ||| ||||| || ||| | | Sbjct 5890 ACCAATCTGTAGTTGA---TAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCA 5946 Query 155885 ACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTG 155944 |||| ||| | ||||||||||| ||||| || ||||||||||| ||||||||||| | Sbjct 5947 ACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAG 6006 Query 155945 ACCTTGCTGC 155954 | || ||||| Sbjct 6007 ATCTAGCTGC 6016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584644689933600