Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq21827 480 2e-131 >seq21827 Length=6214 Score = 480 bits (532), Expect = 2e-131 Identities = 699/985 (71%), Gaps = 2/985 (0%) Strand=Plus/Minus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||| |||||||| ||||| ||||||||||| || ||||| ||||||||||| | | Sbjct 6014 AGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAGTT 5955 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 | ||| | || ||||||||| ||| ||| || ||| | | || ||||| || Sbjct 5954 AGCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGA 5895 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAG 40711 ||||| || || |||||||| | ||||||||||||||| ||||| | | || | Sbjct 5894 TTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 5835 Query 40712 CCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAA 40771 ||| || || | || || ||||| | || |||||||||| | ||| |||||||| Sbjct 5834 CCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTGAA 5775 Query 40772 TGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGT 40831 ||||||||| || || | || ||||| ||||| || ||||||||||| || || || Sbjct 5774 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAGGT 5715 Query 40832 CTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCG 40891 || | || ||||| || | || || | || |||||| |||| ||||| |||| Sbjct 5714 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 5655 Query 40892 AATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGAC 40951 || | ||||| || | | || ||||||||| || | | || || || || Sbjct 5654 GATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATAC 5595 Query 40952 GCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGAC 41011 || || ||||| | ||| || ||||||||||| || |||||||| || |||||||| || Sbjct 5594 ACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATAC 5535 Query 41012 AAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTG 41071 || |||||||||||| || ||| |||||||| ||||||||| ||||| || || || Sbjct 5534 AATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTG 5475 Query 41072 ACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCAC 41131 ||| | |||||| | ||||| ||||| ||| |||| | ||||||| ||||| || Sbjct 5474 ACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 5415 Query 41132 AAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGC 41191 | ||||| || | |||||| || | | | ||||||||||| | ||| || Sbjct 5414 AGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACA 5355 Query 41192 TGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCA 41251 ||||| || | ||||||||| | ||||| || | ||| || || || ||||||| ||| Sbjct 5354 AGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCA 5295 Query 41252 CTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCT 41311 || || | | | |||||||| || ||||| ||||| | || || || ||| | Sbjct 5294 TTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGAAGT 5235 Query 41312 CGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTC 41371 |||| | || ||||| ||||||||||| || || | || || || ||||| || || Sbjct 5234 AGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTC 5175 Query 41372 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGG 41430 ||| || ||||| |||||||| || || || || || || ||||| || || ||| | | Sbjct 5174 ACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAG 5116 Query 41431 TAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGT 41490 | || || | ||| | || ||||| | ||||||||||| || | ||| || ||||| | Sbjct 5115 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 5056 Query 41491 CGGTGCTAGTGACCCAGTTACAAAA 41515 | ||||| || | ||||||||| || Sbjct 5055 CAGTGCTGGTTATCCAGTTACAGAA 5031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143657929496040