Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq21827 572 2e-158 >seq21827 Length=6214 Score = 572 bits (634), Expect = 2e-158 Identities = 724/990 (73%), Gaps = 14/990 (1%) Strand=Plus/Minus Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCC-AAG 67417 ||||| || || ||||||||||| ||||||||||| || |||||||||||||| || ||| Sbjct 6016 GCAGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAG 5957 Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAAC 67474 | || | ||| | || || ||||| ||| ||| || || |||| ||||| Sbjct 5956 TTA-GCACGGTTGATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAAC 5901 Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGC 67534 || ||||||||||| |||||||| || | ||| || |||||||| | ||| | || Sbjct 5900 TACAGATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGC 5841 Query 67535 AGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTT 67594 ||||||||| || | || ||||| | ||||| ||||||||||| | | | ||||| Sbjct 5840 AGTGAACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTT 5781 Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654 ||||||| ||||| ||||||||||| || || || || ||||||||||| || || || Sbjct 5780 GTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATT 5721 Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714 ||| || ||||| ||||| ||||| ||||||| | || || || | || || || Sbjct 5720 GTAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGT 5661 Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774 ||| ||||| | | |||||| || | ||||| ||||||||||| || || || || || Sbjct 5660 TTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCC 5601 Query 67775 GAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTG 67834 ||||||||| ||||| || | ||| || |||||||||||||||||||||||||| ||||| Sbjct 5600 GAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTG 5541 Query 67835 GAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGA 67894 ||| || | |||| |||| ||||||||||| || || |||||||| ||||||| || Sbjct 5540 GAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCT 5481 Query 67895 ACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTA 67954 |||||||| | ||||||| |||||| ||||| || || | || ||||| || || Sbjct 5480 TCCTTGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATA 5421 Query 67955 TGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACC--- 68011 ||| ||| |||||||| |||||||| |||||| || ||||||||||| |||||| Sbjct 5420 TGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 5361 Query 68012 ACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATT 68071 | | | ||| | || | | ||||| | || | || | |||| |||||||| Sbjct 5360 ATAACAAGCT---ACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATT 5304 Query 68072 ATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGC 68131 || ||||| ||||| | | || |||||||| || || || || || | ||| || || Sbjct 5303 GTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGC 5244 Query 68132 GTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGC 68191 ||| |||||| || ||||||||||| || ||||| || || | || || || | Sbjct 5243 TGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGA 5184 Query 68192 AACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAA 68251 ||||||||| | |||||||| ||||| || ||||| || |||||||| || || || || Sbjct 5183 AACAGGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAA 5124 Query 68252 GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGAT 68311 || | ||| | | ||| ||| |||||||| ||||| ||||| |||| || | Sbjct 5123 TACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 5064 Query 68312 GCGATTGTCAACTGAGGTGACCCAGTTACA 68341 || || ||| ||| | ||||||||| Sbjct 5063 ACGGTTTTCAGTGCTGGTTATCCAGTTACA 5034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566762516949600