Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 572 2e-158
>seq21827
Length=6214
Score = 572 bits (634), Expect = 2e-158
Identities = 724/990 (73%), Gaps = 14/990 (1%)
Strand=Plus/Minus
Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCC-AAG 67417
||||| || || ||||||||||| ||||||||||| || |||||||||||||| || |||
Sbjct 6016 GCAGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAG 5957
Query 67418 TCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAAC 67474
| || | ||| | || || ||||| ||| ||| || || |||| |||||
Sbjct 5956 TTA-GCACGGTTGATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAAC 5901
Query 67475 GACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGC 67534
|| ||||||||||| |||||||| || | ||| || |||||||| | ||| | ||
Sbjct 5900 TACAGATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGC 5841
Query 67535 AGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTT 67594
||||||||| || | || ||||| | ||||| ||||||||||| | | | |||||
Sbjct 5840 AGTGAACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTT 5781
Query 67595 GTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTT 67654
||||||| ||||| ||||||||||| || || || || ||||||||||| || || ||
Sbjct 5780 GTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATT 5721
Query 67655 GTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGT 67714
||| || ||||| ||||| ||||| ||||||| | || || || | || || ||
Sbjct 5720 GTAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGT 5661
Query 67715 TTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774
||| ||||| | | |||||| || | ||||| ||||||||||| || || || || ||
Sbjct 5660 TTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCC 5601
Query 67775 GAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTG 67834
||||||||| ||||| || | ||| || |||||||||||||||||||||||||| |||||
Sbjct 5600 GAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTG 5541
Query 67835 GAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGA 67894
||| || | |||| |||| ||||||||||| || || |||||||| ||||||| ||
Sbjct 5540 GAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCT 5481
Query 67895 ACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTA 67954
|||||||| | ||||||| |||||| ||||| || || | || ||||| || ||
Sbjct 5480 TCCTTGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATA 5421
Query 67955 TGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACC--- 68011
||| ||| |||||||| |||||||| |||||| || ||||||||||| ||||||
Sbjct 5420 TGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 5361
Query 68012 ACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATT 68071
| | | ||| | || | | ||||| | || | || | |||| ||||||||
Sbjct 5360 ATAACAAGCT---ACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATT 5304
Query 68072 ATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGC 68131
|| ||||| ||||| | | || |||||||| || || || || || | ||| || ||
Sbjct 5303 GTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGC 5244
Query 68132 GTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGC 68191
||| |||||| || ||||||||||| || ||||| || || | || || || |
Sbjct 5243 TGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGA 5184
Query 68192 AACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAA 68251
||||||||| | |||||||| ||||| || ||||| || |||||||| || || || ||
Sbjct 5183 AACAGGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAA 5124
Query 68252 GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGAT 68311
|| | ||| | | ||| ||| |||||||| ||||| ||||| |||| || |
Sbjct 5123 TACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 5064
Query 68312 GCGATTGTCAACTGAGGTGACCCAGTTACA 68341
|| || ||| ||| | |||||||||
Sbjct 5063 ACGGTTTTCAGTGCTGGTTATCCAGTTACA 5034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566762516949600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |