Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 722 0.0
seq25415 554 5e-153
>seq21827
Length=6214
Score = 722 bits (800), Expect = 0.0
Identities = 744/968 (77%), Gaps = 4/968 (0%)
Strand=Plus/Minus
Query 67840 GCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAA 67899
||||| || || ||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct 6016 GCAGCTAGATCTAGAGGGAAGTTATGAGCGTTACGTTCATGCATAACTTCCATACCCAAG 5957
Query 67900 CCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATA 67959
||| ||||||| || || ||||||||| | || ||| |||||||| | |
Sbjct 5956 TTAGCACGGTTGATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 5897
Query 67960 GACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTG 68019
|| |||||||| ||||||||||| | ||| || ||||| ||||||| ||| | ||||||
Sbjct 5896 GATTGGTTGAAATTGAAACCATTTAAGTTAAAAGCCATAGTGCTAATACCTAAAGCAGTG 5837
Query 68020 AACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTG 68079
||||| ||||| || |||||||| ||||| ||||||||||| | ||||| |||||||||
Sbjct 5836 AACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAGTTGTTG 5777
Query 68080 AACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAA 68139
|| ||||| |||||||||| || || || || ||||| ||||| || || |||||
Sbjct 5776 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTGTAG 5717
Query 68140 GTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCA 68199
|| ||||| ||||||||||| ||||||| | || || ||| |||| ||||||||
Sbjct 5716 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 5657
Query 68200 CGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAAT 68259
| | || |||||| |||| |||||||||||| |||||||| || || || || |||
Sbjct 5656 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 5597
Query 68260 ACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAC 68319
|| ||||| ||||| | ||| || || |||||||| |||||||||||||| ||||||||
Sbjct 5596 ACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAAT 5537
Query 68320 ACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCT 68379
|| | |||| |||||||||||||||| || || |||||||| ||||||| || |||
Sbjct 5536 ACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCT 5477
Query 68380 TGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCA 68439
||||| | ||||||| || ||| || || | || ||||||||||| || || ||||||
Sbjct 5476 TGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 5417
Query 68440 ACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTAT 68499
||| |||||||| |||||||| ||||| | ||||||||| ||||| ||||| ||
Sbjct 5416 ACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAA 5357
Query 68500 GCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAAC 68559
| | ||||| | ||||| | | | || | |||||||||||||||| |||
Sbjct 5356 CAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAAC 5297
Query 68560 CACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAA 68619
|| ||||||| || || |||||||| || || ||||| || | ||| || || |||
Sbjct 5296 CATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATCGCTGCAGAA 5237
Query 68620 CTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGT 68679
|||||| || ||||||||||| || ||||| ||||| || || || |||| |||||||
Sbjct 5236 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGT 5177
Query 68680 TCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGAT 68738
|||||||||||||| || || || || || ||||| ||||| |||| || || |||||
Sbjct 5176 TCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA- 5118
Query 68739 GGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGT 68797
||||| | ||| || ||||||||||||| || || ||||| |||| |||||| ||||
Sbjct 5117 AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGT 5059
Query 68798 TCTCTGTG 68805
| || |||
Sbjct 5058 TTTCAGTG 5051
>seq25415
Length=1491
Score = 554 bits (614), Expect = 5e-153
Identities = 731/1008 (73%), Gaps = 4/1008 (0%)
Strand=Plus/Minus
Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645
||||||| || || |||||||| ||||| || || ||||||| || ||||||||| || |
Sbjct 1383 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 1324
Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705
|||| || |||| ||| ||||||| |||||| || || ||||| || || |||||||
Sbjct 1323 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 1264
Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765
| ||||| || || || ||||| ||||| | ||| || || || || |||||||| ||||
Sbjct 1263 AAGTCTCAAATTCCGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCAC 1204
Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825
| || || || || ||||| | | || | | ||| |||| | ||| | || || |
Sbjct 1203 GTAGATTCAGGGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 1144
Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885
|||| |||||||||||||| ||||| | |||||| ||| |||| |||||||| || |
Sbjct 1143 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 1084
Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945
|||| |||||||| || || |||||||| ||||||||||| ||||||| | || || |
Sbjct 1083 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 1024
Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005
| ||| || ||||| |||||||||||| | | |||||| ||||| ||| ||||||
Sbjct 1023 CCCGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCAT 964
Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065
|||| || | |||| ||| | |||| | || || || |||||||||||||| ||||
Sbjct 963 GAATAGCGCATAGCAGAGCAGCGCCCAATACCCCAGCAACTCCCATCATATGAAATGGGT 904
Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125
|||| ||||| ||||| || ||||| | ||||| | ||||||||| || || | || |
Sbjct 903 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACAC 844
Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185
| ||| ||| || || ||||||| || ||||| || || || || || || ||| ||
Sbjct 843 CAAAACTTGGCGCAAAGAACCAACCAGACTGACCTAGCGGATAAATCAGGAATACAGAAA 784
Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA- 67244
||||||| || || ||||| ||||| || || ||||| || || || | | || |||
Sbjct 783 CAAAAACCGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGTA-ATTGAACAGAT 725
Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304
|| || |||||||| || || | ||||||||| ||||| ||||||| ||||| || ||
Sbjct 724 CGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGCGCCGTGAAGAGCA 665
Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364
|||||| |||| || || || | ||| ||| || ||||| || || | |||||
Sbjct 664 ACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGG 605
Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTG 67424
||||| |||| | | ||| || | | | || |||||| || || || || || ||
Sbjct 604 CCCCATAGTAACAACAAAGAGTGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCGGTT 545
Query 67425 AGAAAATTAGCA-CCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGAC 67483
| | || | ||| || || | ||| | || | ||| || || ||||| || ||
Sbjct 544 A-AGAAGTTGCAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTAC 486
Query 67484 AAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAG 67543
||| || ||||| |||| ||| || || | || | ||| ||| ||||| || | |||
Sbjct 485 AAAGGTTGTACCTGTAAACCAACCCCCTACGGCGAAATAGGCACAAGGAAAGAGCAATAG 426
Query 67544 TCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591
|| |||||||| ||||| || || || || | | |||||||||
Sbjct 425 ACCGGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATC 378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571868053279200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |