Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq22773 104 7e-17 seq18889 102 2e-16 >seq22773 Length=730387 Score = 104 bits (114), Expect = 7e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 ||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct 300297 TGTATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCCTAGATTCTGCTGGT 300356 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || || || || ||||| ||||| || ||||||||||| || ||||| |||||| Sbjct 300357 TGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGTG 300416 >seq18889 Length=1054283 Score = 102 bits (112), Expect = 2e-16 Identities = 594/932 (64%), Gaps = 33/932 (4%) Strand=Plus/Plus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTG-TCGTCGCT-GTATTCT--AC 155638 ||| |||| || |||| ||||| || || | ||| || | ||| |||| || || Sbjct 964611 AGAGCAATTGAGGCCAAGTTACAGACGGC----TACTTCATCTTTGCTTGTATACTCCAC 964666 Query 155639 AATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACT 155698 ||||||| ||||| |||| | ||||||||||| ||||||| ||||||| || || Sbjct 964667 AATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCT 964726 Query 155699 GTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758 |||||| ||||| ||||| | ||||| || ||||| || || |||| | || | || Sbjct 964727 GTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGAT 964786 Query 155759 CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT 155818 ||| | | | || || | | || ||| || ||| |||||| Sbjct 964787 GGCATACCACACCTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATCG 964846 Query 155819 CATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGG 155877 | |||||| ||| || ||||| || |||| ||| || |||||||||| | || Sbjct 964847 TGTGTACAGC-TTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGG 964905 Query 155878 GGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGC 155935 | || | || ||||| | || || ||| ||| ||| || | ||| Sbjct 964906 GACACATCAAAGACCAGTCCTGGTT--GTTTTCCACTCTCTTCATGAACAGGTCAGGGAT 964963 Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTA 155994 ||| | |||||||| ||||| | ||| | |||||| | || ||| |||||| | Sbjct 964964 CCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTG-TTCTTCTTCA 965022 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA-ACTACCA 156053 |||| | || || | |||| || |||||||| || || ||||| | || Sbjct 965023 GCTCAAGAAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCG 965082 Query 156054 TTC--CTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 || | |||||||| || || ||||| || ||||| || ||| | || | ||||| | Sbjct 965083 GTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCG 965142 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 | | || |||||| || | ||||| ||||| ||| | || | ||| | || | Sbjct 965143 GCACAAGACCATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCCTGTTGATCTAATAC 965202 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 || || ||||| || |||| ||||||| || |||| |||| || | | Sbjct 965203 AGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTG 965262 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 | | |||| || ||||| ||||| | ||| | || || |||| | | Sbjct 965263 TGTCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCT 965322 Query 156292 GAGGTCGTGGT-GTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350 | |||| || | || || |||||||| || || || | |||||| | || |||| | | Sbjct 965323 GGGGTC-TGTTAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCA 965381 Query 156351 GACATATAATCGTATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAATACAGATA 156407 |||| | ||| ||||| ||| || | || | || ||| ||| || | || | Sbjct 965382 GACAGCAGGTTGTAGGTCTC---AATGGCTGCATCTATATCAGAGTTGTGGATTCCGACA 965438 Query 156408 GAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT---CCATCAATTCGCAGA 156464 | || ||||| ||| ||||| || |||| || |||| |||| ||| ||| Sbjct 965439 GCTACTCTCATGAGCATGTGCTGTGGGCGCT---CAGCCACTTTACCATTGATTTTCAGC 965495 Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 | ||| | ||| || || |||||||| || || Sbjct 965496 AAGTAAGAGCGCTCTAGCGTTTTAAAGCCAAA 965527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471326169302220