Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq22773 104 7e-17
seq18889 102 2e-16
>seq22773
Length=730387
Score = 104 bits (114), Expect = 7e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688
||||||||||||||||| ||||||||| |||||||||||||| ||||| |||||
Sbjct 300297 TGTATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCCTAGATTCTGCTGGT 300356
Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748
| || || || || ||||| ||||| || ||||||||||| || ||||| ||||||
Sbjct 300357 TGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGTG 300416
>seq18889
Length=1054283
Score = 102 bits (112), Expect = 2e-16
Identities = 594/932 (64%), Gaps = 33/932 (4%)
Strand=Plus/Plus
Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTG-TCGTCGCT-GTATTCT--AC 155638
||| |||| || |||| ||||| || || | ||| || | ||| |||| || ||
Sbjct 964611 AGAGCAATTGAGGCCAAGTTACAGACGGC----TACTTCATCTTTGCTTGTATACTCCAC 964666
Query 155639 AATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACT 155698
||||||| ||||| |||| | ||||||||||| ||||||| ||||||| || ||
Sbjct 964667 AATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCT 964726
Query 155699 GTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758
|||||| ||||| ||||| | ||||| || ||||| || || |||| | || | ||
Sbjct 964727 GTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGAT 964786
Query 155759 CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT 155818
||| | | | || || | | || ||| || ||| ||||||
Sbjct 964787 GGCATACCACACCTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATCG 964846
Query 155819 CATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGG 155877
| |||||| ||| || ||||| || |||| ||| || |||||||||| | ||
Sbjct 964847 TGTGTACAGC-TTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGG 964905
Query 155878 GGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGC 155935
| || | || ||||| | || || ||| ||| ||| || | |||
Sbjct 964906 GACACATCAAAGACCAGTCCTGGTT--GTTTTCCACTCTCTTCATGAACAGGTCAGGGAT 964963
Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTA 155994
||| | |||||||| ||||| | ||| | |||||| | || ||| |||||| |
Sbjct 964964 CCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTG-TTCTTCTTCA 965022
Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA-ACTACCA 156053
|||| | || || | |||| || |||||||| || || ||||| | ||
Sbjct 965023 GCTCAAGAAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCG 965082
Query 156054 TTC--CTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111
|| | |||||||| || || ||||| || ||||| || ||| | || | ||||| |
Sbjct 965083 GTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCG 965142
Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171
| | || |||||| || | ||||| ||||| ||| | || | ||| | || |
Sbjct 965143 GCACAAGACCATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCCTGTTGATCTAATAC 965202
Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231
|| || ||||| || |||| ||||||| || |||| |||| || | |
Sbjct 965203 AGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTG 965262
Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291
| | |||| || ||||| ||||| | ||| | || || |||| | |
Sbjct 965263 TGTCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCT 965322
Query 156292 GAGGTCGTGGT-GTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350
| |||| || | || || |||||||| || || || | |||||| | || |||| | |
Sbjct 965323 GGGGTC-TGTTAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCA 965381
Query 156351 GACATATAATCGTATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAATACAGATA 156407
|||| | ||| ||||| ||| || | || | || ||| ||| || | || |
Sbjct 965382 GACAGCAGGTTGTAGGTCTC---AATGGCTGCATCTATATCAGAGTTGTGGATTCCGACA 965438
Query 156408 GAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT---CCATCAATTCGCAGA 156464
| || ||||| ||| ||||| || |||| || |||| |||| ||| |||
Sbjct 965439 GCTACTCTCATGAGCATGTGCTGTGGGCGCT---CAGCCACTTTACCATTGATTTTCAGC 965495
Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496
| ||| | ||| || || |||||||| || ||
Sbjct 965496 AAGTAAGAGCGCTCTAGCGTTTTAAAGCCAAA 965527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471326169302220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |