Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq21827 587 8e-163 seq25415 509 2e-139 >seq21827 Length=6214 Score = 587 bits (650), Expect = 8e-163 Identities = 710/961 (74%), Gaps = 4/961 (0%) Strand=Plus/Plus Query 157607 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 157666 ||||| || || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117 Query 157667 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 157725 ||||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176 Query 157726 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 157785 ||| || |||| || || | ||||| ||||| || || |||||||| || | || | Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236 Query 157786 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 157845 ||| || || ||| | || || || || || |||||||| || || ||||||| || Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296 Query 157846 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGC 157905 | | || || |||||||||| | || | || | ||||| | ||||| | | Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356 Query 157906 ATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 157965 || ||||| ||||||||||||||| | |||| | ||||||||||| ||||| ||| Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 5416 Query 157966 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158025 |||||||| ||||| || || || || ||||||| ||| | ||||||| | ||||| Sbjct 5417 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCA 5476 Query 158026 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158085 ||| || || || | ||||||||| || |||||||||||||| |||| |||| |||| Sbjct 5477 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5536 Query 158086 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158145 ||||||||| || |||||||||||||||||||| || || ||| | || || ||||| || Sbjct 5537 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5596 Query 158146 ATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 158204 |||||| || || || ||| ||||||||| || | || ||||| | | | || Sbjct 5597 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 5655 Query 158205 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGA 158264 | ||||| || |||| || || || | ||||||| ||||||||||||||||| | Sbjct 5656 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 5715 Query 158265 CCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 158324 |||| || ||||| || || ||||| || || || || |||||||||||||| ||| | Sbjct 5716 CCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 5775 Query 158325 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 158384 |||||||||| ||||| || ||||||||||| ||||| |||||||| || || || |||| Sbjct 5776 TCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGT 5835 Query 158385 TCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 158444 |||| || | || | ||| ||||| || ||| | || |||||||| |||||||| | Sbjct 5836 TCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAAT 5895 Query 158445 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTG 158504 | | ||||| |||| |||||||| | || |||||||| ||| | | ||||| ||| Sbjct 5896 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTA 5955 Query 158505 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTG 158564 | |||||||||||||||||||| |||||||| || |||||||| || || || |||| Sbjct 5956 ACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTG 6015 Query 158565 C 158565 | Sbjct 6016 C 6016 >seq25415 Length=1491 Score = 509 bits (564), Expect = 2e-139 Identities = 721/1008 (72%), Gaps = 4/1008 (0%) Strand=Plus/Plus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 ||||||||| | | || || || |||||||| || ||||| || ||| | || || Sbjct 378 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 437 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || ||| ||| | ||| | || |||||| |||| || ||| | ||||| || ||| Sbjct 438 CCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGG 497 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGG-TGCTAACTTTCTCACAGCAGCTGT 159484 || ||||| || | || ||||||||| | || || ||| ||||| | || || || || Sbjct 498 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGT 556 Query 159485 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCA 159544 || || |||||| | | | | || ||| | | |||| ||||| ||||| | || Sbjct 557 TTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCACA 616 Query 159545 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGG 159604 || |||| || ||||| ||| | || || | |||| |||||| || || ||||| Sbjct 617 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGG 676 Query 159605 TGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCTCATTGGTA 159663 || |||| ||||| ||||||||| | ||||| |||||||| || || ||| | | Sbjct 677 CGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT- 735 Query 159664 TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCC 159723 | || ||||| ||||| || || ||||| ||||| ||||| |||||||| || |||| Sbjct 736 TACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCC 795 Query 159724 TCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAA 159783 | || || || | |||||||| ||||||| || || || ||||| || || || | Sbjct 796 TGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTA 855 Query 159784 TCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATA 159843 | ||| ||||| | | || | ||||| ||||| || ||||| || || || || |||| Sbjct 856 TATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATA 915 Query 159844 TGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTG 159903 |||||||||||||||| || | || | || || || | || || ||||| | ||| | Sbjct 916 TGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCG 975 Query 159904 TAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAA 159963 |||| || || | | ||||||||| || |||||||| || ||| ||| | ||| Sbjct 976 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAA 1035 Query 159964 CTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCG 160023 |||||| || || ||||| || |||||||| || |||||||| ||||| || ||||| | Sbjct 1036 CTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTG 1095 Query 160024 GTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTATGG 160083 | |||| ||||| || || || ||| | |||||||| ||||| ||||| || || | | Sbjct 1096 GGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCG 1155 Query 160084 GTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTTACGATT 160143 || | |||| || |||| | | || || || || ||||| ||||| || || | Sbjct 1156 GTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACT 1215 Query 160144 TCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAA 160203 |||| ||| || ||| | ||||| |||||||| ||||||||||| ||||||||||||| Sbjct 1216 TCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAAAA 1275 Query 160204 ACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGAAA 160263 | || || || |||||||| | ||||| ||| |||| || ||||| || ||||||| Sbjct 1276 ATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAA 1335 Query 160264 ACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311 || |||| ||||| || || || | || | || ||||| ||||||| Sbjct 1336 ACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 1383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548195767039200