Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq23769 176 5e-38 seq23633 176 5e-38 seq23540 176 5e-38 seq22736 176 5e-38 seq17191 176 5e-38 seq1952 176 5e-38 seq23118 174 2e-37 seq21518 161 1e-33 seq19539 161 1e-33 seq20709 143 3e-28 seq8638 91.5 2e-12 seq18494 86.0 8e-11 >seq23769 Length=2378 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 711 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 652 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | | Sbjct 651 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 592 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 591 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 532 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 531 GGACCTGCTTGAGCACCTTGTA 510 >seq23633 Length=2564 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 1998 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 1939 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | | Sbjct 1938 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 1879 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1878 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 1819 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 1818 GGACCTGCTTGAGCACCTTGTA 1797 >seq23540 Length=2231 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 390 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 449 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | | Sbjct 450 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 509 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 510 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 569 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 570 GGACCTGCTTGAGCACCTTGTA 591 >seq22736 Length=8147 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 5621 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 5680 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | | Sbjct 5681 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 5740 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 5741 TGTCGTTGACAAATGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 5800 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 5801 GGACCTGCTTGAGCACCTTGTA 5822 >seq17191 Length=53944 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 8775 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 8834 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | | Sbjct 8835 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 8894 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 8895 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 8954 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 8955 GGACCTGCTTGAGCACCTTGTA 8976 >seq1952 Length=121728 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 1894 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 1953 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | | Sbjct 1954 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 2013 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2014 TGTCGTTGACAAATGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 2073 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 2074 GGACCTGCTTGAGCACCTTGTA 2095 >seq23118 Length=227226 Score = 174 bits (192), Expect = 2e-37 Identities = 158/199 (79%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||| | Sbjct 225133 TGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGATGG 225192 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || ||||||||| |||||||||| ||| |||||| ||||||||| || | |||| Sbjct 225193 TGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGATGT 225252 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| |||||||||| ||| | |||| ||||||||| ||||||||| | Sbjct 225253 CGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGA 225312 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||||||||||||||| Sbjct 225313 CCTGCTTGAGCACCTTGTA 225331 >seq21518 Length=5902 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 3969 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 4028 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| |||||| | |||| | Sbjct 4029 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATCCTCTCGAAGA 4088 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 4089 TGTCGTTGACGAAGGAGTTCATGATACTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 4148 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 4149 GGACCTGCTTCAGCACCTTGTA 4170 >seq19539 Length=19330 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 17673 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 17614 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| |||||| |||||| | |||| | Sbjct 17613 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATCCTCTCGAAGA 17554 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 17553 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 17494 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 17493 GGACCTGCTTCAGCACCTTGTA 17472 >seq20709 Length=307029 Score = 143 bits (158), Expect = 3e-28 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || ||| ||| | |||||||| |||||||||||||| | | | ||| ||| Sbjct 39912 GCCAGCTCTCCGGGCAGCAGGAGGCGCACAGCGGTCTGGATCTCCCTGGAGGTGATGGTG 39853 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| |||||||||| ||| |||||| ||||| | |||| |||||| Sbjct 39852 GAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCACCGATTCTCTCGAAGATGTCG 39793 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||||||| ||| | |||| |||||| || ||||||||| ||| Sbjct 39792 TTGACGAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATACCGGTGTCGGGGTGGACC 39733 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 39732 TGCTTCAGCACCTTGTA 39716 Score = 132 bits (146), Expect = 6e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 |||||||| |||||||||||||| | | | ||| ||| ||||||||| |||||||| Sbjct 27580 AGGCGCACAGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGTGCGCC 27521 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 || ||| |||||| || || | |||| ||||||||||| || |||||||||| Sbjct 27520 AGGCGGGAGGCCTCTCCACCAATTCTCTCGAAGATGTCGTTGACGAAAGAGTTCATGATG 27461 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | |||| |||||| || ||||||||| |||||||| ||||||||||| Sbjct 27460 CTCATGGCCTTGGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGTA 27405 >seq8638 Length=602592 Score = 91.5 bits (100), Expect = 2e-12 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||||||| ||| ||| || ||||||||| || ||||| | ||| | || ||| | Sbjct 45963 TGGCCAGTTCCCCGGGCAGGAGCAGGCGCACCGCAGTCTGCACCTCTCTGCTGGTGATGG 45904 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || ||||||||| | ||||| | |||| || || ||| | || | |||| || || Sbjct 45903 TGGAGCGCTTGTTGTACTGCGCTAAACGGGACGCTTCTGTGGCAATCCTCTCGAACAGGT 45844 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 | || || || |||||||| | ||| | | | ||||||||||| ||| || || | Sbjct 45843 CATTCACGAAGGAGTTCATAATGCTCATGGCCCGGCTGGAGATGCCCGTGTCCGGATGTA 45784 Query 1254526 CCT 1254528 ||| Sbjct 45783 CCT 45781 >seq18494 Length=36300 Score = 86.0 bits (94), Expect = 8e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || || ||| | ||||| ||| ||| || || | ||| || ||||||||||| Sbjct 22378 GCAGCGAATTACTTGGACATTAAGGGTCTTCTGGACGTGACGTGTAAAACTGTGGCCAAC 22319 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||| || ||| | |||||||| ||| | ||||| |||||||||||| ||| Sbjct 22318 ATGATCAAAGGAAAGACCCCCGAGGAAATCAGGAAGACTTTTAACATCAAGAACG 22264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105000594361020