Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq23769 176 5e-38
seq23633 176 5e-38
seq23540 176 5e-38
seq22736 176 5e-38
seq17191 176 5e-38
seq1952 176 5e-38
seq23118 174 2e-37
seq21518 161 1e-33
seq19539 161 1e-33
seq20709 143 3e-28
seq8638 91.5 2e-12
seq18494 86.0 8e-11
>seq23769
Length=2378
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 711 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 652
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | |
Sbjct 651 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 592
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 591 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 532
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||||||||||||
Sbjct 531 GGACCTGCTTGAGCACCTTGTA 510
>seq23633
Length=2564
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 1998 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 1939
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | |
Sbjct 1938 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 1879
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 1878 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 1819
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||||||||||||
Sbjct 1818 GGACCTGCTTGAGCACCTTGTA 1797
>seq23540
Length=2231
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 390 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 449
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | |
Sbjct 450 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 509
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 510 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 569
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||||||||||||
Sbjct 570 GGACCTGCTTGAGCACCTTGTA 591
>seq22736
Length=8147
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 5621 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 5680
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | |
Sbjct 5681 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 5740
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 5741 TGTCGTTGACAAATGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 5800
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||||||||||||
Sbjct 5801 GGACCTGCTTGAGCACCTTGTA 5822
>seq17191
Length=53944
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 8775 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 8834
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | |
Sbjct 8835 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 8894
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 8895 TGTCGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 8954
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||||||||||||
Sbjct 8955 GGACCTGCTTGAGCACCTTGTA 8976
>seq1952
Length=121728
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 1894 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 1953
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| ||||||||| || | |
Sbjct 1954 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGA 2013
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 2014 TGTCGTTGACAAATGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 2073
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| ||||||||||||||||||||
Sbjct 2074 GGACCTGCTTGAGCACCTTGTA 2095
>seq23118
Length=227226
Score = 174 bits (192), Expect = 2e-37
Identities = 158/199 (79%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||| |
Sbjct 225133 TGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGATGG 225192
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| ||||||||| |||||||||| ||| |||||| ||||||||| || | ||||
Sbjct 225193 TGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATGCGCTCAAAGATGT 225252
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
|||||||||| |||||||||| ||| | |||| ||||||||| ||||||||| |
Sbjct 225253 CGTTGACAAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGGA 225312
Query 1254526 CCTGCTTGAGCACCTTGTA 1254544
|||||||||||||||||||
Sbjct 225313 CCTGCTTGAGCACCTTGTA 225331
>seq21518
Length=5902
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 3969 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 4028
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| |||||| | |||| |
Sbjct 4029 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATCCTCTCGAAGA 4088
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 4089 TGTCGTTGACGAAGGAGTTCATGATACTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 4148
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 4149 GGACCTGCTTCAGCACCTTGTA 4170
>seq19539
Length=19330
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||||||||||||||||||||||| | | | ||
Sbjct 17673 GCTTGGCCAGCTCTCCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 17614
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| |||||| |||||| | |||| |
Sbjct 17613 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCGCCGATCCTCTCGAAGA 17554
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 17553 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 17494
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 17493 GGACCTGCTTCAGCACCTTGTA 17472
>seq20709
Length=307029
Score = 143 bits (158), Expect = 3e-28
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
||||| || ||| ||| | |||||||| |||||||||||||| | | | ||| |||
Sbjct 39912 GCCAGCTCTCCGGGCAGCAGGAGGCGCACAGCGGTCTGGATCTCCCTGGAGGTGATGGTG 39853
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
||||||||| |||||||||| ||| |||||| ||||| | |||| ||||||
Sbjct 39852 GAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCTCCACCGATTCTCTCGAAGATGTCG 39793
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
||||| || |||||||||| ||| | |||| |||||| || ||||||||| |||
Sbjct 39792 TTGACGAAAGAGTTCATGATGCTCATGGCCTTGGAGGAGATACCGGTGTCGGGGTGGACC 39733
Query 1254528 TGCTTGAGCACCTTGTA 1254544
||||| |||||||||||
Sbjct 39732 TGCTTCAGCACCTTGTA 39716
Score = 132 bits (146), Expect = 6e-25
Identities = 135/176 (77%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428
|||||||| |||||||||||||| | | | ||| ||| ||||||||| ||||||||
Sbjct 27580 AGGCGCACAGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGTGCGCC 27521
Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488
|| ||| |||||| || || | |||| ||||||||||| || ||||||||||
Sbjct 27520 AGGCGGGAGGCCTCTCCACCAATTCTCTCGAAGATGTCGTTGACGAAAGAGTTCATGATG 27461
Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544
||| | |||| |||||| || ||||||||| |||||||| |||||||||||
Sbjct 27460 CTCATGGCCTTGGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGTA 27405
>seq8638
Length=602592
Score = 91.5 bits (100), Expect = 2e-12
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
|||||||||| ||| ||| || ||||||||| || ||||| | ||| | || ||| |
Sbjct 45963 TGGCCAGTTCCCCGGGCAGGAGCAGGCGCACCGCAGTCTGCACCTCTCTGCTGGTGATGG 45904
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
|| ||||||||| | ||||| | |||| || || ||| | || | |||| || ||
Sbjct 45903 TGGAGCGCTTGTTGTACTGCGCTAAACGGGACGCTTCTGTGGCAATCCTCTCGAACAGGT 45844
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
| || || || |||||||| | ||| | | | ||||||||||| ||| || || |
Sbjct 45843 CATTCACGAAGGAGTTCATAATGCTCATGGCCCGGCTGGAGATGCCCGTGTCCGGATGTA 45784
Query 1254526 CCT 1254528
|||
Sbjct 45783 CCT 45781
>seq18494
Length=36300
Score = 86.0 bits (94), Expect = 8e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || || ||| | ||||| ||| ||| || || | ||| || |||||||||||
Sbjct 22378 GCAGCGAATTACTTGGACATTAAGGGTCTTCTGGACGTGACGTGTAAAACTGTGGCCAAC 22319
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
|||||||| || ||| | |||||||| ||| | ||||| |||||||||||| |||
Sbjct 22318 ATGATCAAAGGAAAGACCCCCGAGGAAATCAGGAAGACTTTTAACATCAAGAACG 22264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6105000594361020
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