Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2275 140 3e-28
seq4874 91.5 1e-13
>seq2275
Length=118428
Score = 140 bits (154), Expect = 3e-28
Identities = 134/172 (78%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
|| ||||| || |||||||| || || | |||| |||||| || || ||||| || ||
Sbjct 14042 AGATCAGTTTCGGGGTTGTCGCACTCGGAGCACAGCACAAATTTCCGTATGAACCCGTCG 13983
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|||| |||||| | |||| || ||||||||||||||||||||| | || |||||||||
Sbjct 13982 AGCATGTCCTGCAGCTTATTGGCCTCGTGGGAGCCGTTGACGATGTAGCGGTCGTTTTTG 13923
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486
|||||| ||| || || |||||||| || || || || |||| || ||||
Sbjct 13922 GAATCGAACTGGGTCTGAGCGCCCAGTTCACAACCAAAAAACTTGGTTGGGT 13871
>seq4874
Length=535125
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| ||||| || ||||| ||||| | || ||||||||||||||| | || ||||||
Sbjct 501800 AATATGCAGATCTTTGTGAAAACCCTCACTGGCAAAACCATTACCCTTGAGGTGGAGCCC 501859
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| ||| | | | || ||| ||||| || || || ||| | ||| |||
Sbjct 501860 AGCGACACTATTGAGAATGTTAAAGCCAAGATCCAAGATAAGGAGGGCATTCCCCCCGAT 501919
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || || || || | ||| || |||||||| || |||| | | || | | || |||
Sbjct 501920 CAGCAGAGGCTGATCTTTGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCCGACTAC 501979
Query 110450 AACATTCAAAAAGAATCTAC 110469
||||| || |||||||||||
Sbjct 501980 AACATCCAGAAAGAATCTAC 501999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412710478927580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |