Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2275 140 3e-28 seq4874 91.5 1e-13 >seq2275 Length=118428 Score = 140 bits (154), Expect = 3e-28 Identities = 134/172 (78%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || |||||||| || || | |||| |||||| || || ||||| || || Sbjct 14042 AGATCAGTTTCGGGGTTGTCGCACTCGGAGCACAGCACAAATTTCCGTATGAACCCGTCG 13983 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| | |||| || ||||||||||||||||||||| | || ||||||||| Sbjct 13982 AGCATGTCCTGCAGCTTATTGGCCTCGTGGGAGCCGTTGACGATGTAGCGGTCGTTTTTG 13923 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 |||||| ||| || || |||||||| || || || || |||| || |||| Sbjct 13922 GAATCGAACTGGGTCTGAGCGCCCAGTTCACAACCAAAAAACTTGGTTGGGT 13871 >seq4874 Length=535125 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || ||||| ||||| | || ||||||||||||||| | || |||||| Sbjct 501800 AATATGCAGATCTTTGTGAAAACCCTCACTGGCAAAACCATTACCCTTGAGGTGGAGCCC 501859 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| ||| | | | || ||| ||||| || || || ||| | ||| ||| Sbjct 501860 AGCGACACTATTGAGAATGTTAAAGCCAAGATCCAAGATAAGGAGGGCATTCCCCCCGAT 501919 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | ||| || |||||||| || |||| | | || | | || ||| Sbjct 501920 CAGCAGAGGCTGATCTTTGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCCGACTAC 501979 Query 110450 AACATTCAAAAAGAATCTAC 110469 ||||| || ||||||||||| Sbjct 501980 AACATCCAGAAAGAATCTAC 501999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412710478927580