Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq10742 136 3e-27 seq4874 134 9e-27 >seq10742 Length=3397572 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| ||||| | ||| |||| ||| | |||| ||||| |||||||| ||||| Sbjct 2148446 TTTCCTCCTCTCAATCGCAGCACCAAGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCT 2148505 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| |||| |||| || || ||||| || ||||| ||||| | || ||||| | Sbjct 2148506 GAGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGA 2148565 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | ||||| ||||| | || ||| |||||| | | || | ||| | | || Sbjct 2148566 GGGATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCC 2148625 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || |||||||| || || |||||||| |||||||||||||| Sbjct 2148626 ACCTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148675 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| | || |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 2148677 CCTCCTCTCAGACGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2148736 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||| || ||||| ||||| | ||||| || | || Sbjct 2148737 AGAGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGATCAGGAGGA 2148796 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||| ||||| | ||||| ||| || || || || | ||| | | || | Sbjct 2148797 ATACCCTCTTTGTCTTGAATTTTGGCTTTCAC--ATTCTCAATGGTGTCACTTGGTTCAA 2148854 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||| || || |||||||| |||||||||||||| Sbjct 2148855 CCTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148903 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| | || |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 2148905 CCTCCTCTCAGACGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2148964 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || || ||||| || || || ||||| | |||||||| | || Sbjct 2148965 AGAGTGCGGCCATCTTCTAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 2149024 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || || ||| | | || | ||| | | ||| || Sbjct 2149025 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 2149084 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||| || || || |||||||| |||||||||||||| Sbjct 2149085 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCAT 2149131 >seq4874 Length=535125 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| || || | |||| || ||||| ||||| ||||| || Sbjct 502713 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 502654 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| |||||||||||||| | ||||| ||| | || Sbjct 502653 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502594 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | | || | ||| ||| ||| || Sbjct 502593 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATAGTGTCACTGGGCTCCACC 502534 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || |||||||| || |||||||| || |||||||||||||| Sbjct 502533 TCCAGAGTAATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502487 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| | |||||| || || | ||| || ||||| ||||| ||||| || Sbjct 502257 CCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 502198 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| |||||||||||||| | ||||| ||| | || Sbjct 502197 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502138 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | | || | ||| ||| ||| || Sbjct 502137 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502078 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || |||||||| || |||||||| || |||||||||||||| Sbjct 502077 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502031 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| | |||||| || || | ||| || ||||| ||||| ||||| || Sbjct 502485 CCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 502426 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| |||||||||||||| | ||||| ||| | || Sbjct 502425 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502366 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | | || | ||| ||| ||| || Sbjct 502365 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502306 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || |||||||| || |||||||| || |||||||||||||| Sbjct 502305 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502259 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| || ||||| ||||| ||||| || Sbjct 502941 CCACCCCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAG 502882 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| ||||| |||||||| | ||||| ||| | || Sbjct 502881 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 502822 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | | || | ||| ||| ||| || Sbjct 502821 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502762 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || |||||||| || |||||||| || |||||||||||||| Sbjct 502761 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502715 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | |||||| || || | ||| || ||||| ||||| ||||| || Sbjct 502029 CCACCCCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 501970 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || || || || || |||||||| | ||||| || | || Sbjct 501969 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 501910 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | |||||||| || | || || ||| || || || || | || ||| ||| | Sbjct 501909 ATGCCCTCCTTATCTTGGATCTTGGCTTTAAC--ATTCTCAATAGTGTCGCTGGGCTCCA 501852 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| ||| ||||| || || |||||||| || |||||||||||||| Sbjct 501851 CCTCAAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 501803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325589357931140