Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq10742 136 3e-27
seq4874 134 9e-27
>seq10742
Length=3397572
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|||||||| ||||| | ||| |||| ||| | |||| ||||| |||||||| |||||
Sbjct 2148446 TTTCCTCCTCTCAATCGCAGCACCAAGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCT 2148505
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| ||| |||| |||| || || ||||| || ||||| ||||| | || ||||| |
Sbjct 2148506 GAGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGA 2148565
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | ||||| ||||| | || ||| |||||| | | || | ||| | | ||
Sbjct 2148566 GGGATACCCTCTTTGTCCTGGATCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCC 2148625
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | || |||||||| || || |||||||| ||||||||||||||
Sbjct 2148626 ACCTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148675
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| |||| | || |||||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 2148677 CCTCCTCTCAGACGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2148736
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| || || ||||| || ||||| ||||| | ||||| || | ||
Sbjct 2148737 AGAGTGCGGCCATCTTCTAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGATCAGGAGGA 2148796
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| ||||| ||||| | ||||| ||| || || || || | ||| | | || |
Sbjct 2148797 ATACCCTCTTTGTCTTGAATTTTGGCTTTCAC--ATTCTCAATGGTGTCACTTGGTTCAA 2148854
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || |||||||| || || |||||||| ||||||||||||||
Sbjct 2148855 CCTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148903
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| |||| | || |||||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 2148905 CCTCCTCTCAGACGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2148964
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| || || ||||| || || || ||||| | |||||||| | ||
Sbjct 2148965 AGAGTGCGGCCATCTTCTAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 2149024
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || ||||| || | || || || ||| | | || | ||| | | ||| ||
Sbjct 2149025 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 2149084
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || ||||| || || || |||||||| ||||||||||||||
Sbjct 2149085 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCAT 2149131
>seq4874
Length=535125
Score = 134 bits (148), Expect = 9e-27
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| || || | |||| || ||||| ||||| ||||| ||
Sbjct 502713 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 502654
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || ||||| |||||||||||||| | ||||| ||| | ||
Sbjct 502653 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502594
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | | || | ||| ||| ||| ||
Sbjct 502593 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATAGTGTCACTGGGCTCCACC 502534
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || |||||||| || ||||||||||||||
Sbjct 502533 TCCAGAGTAATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502487
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || |||| | |||||| || || | ||| || ||||| ||||| ||||| ||
Sbjct 502257 CCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 502198
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || ||||| |||||||||||||| | ||||| ||| | ||
Sbjct 502197 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502138
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | | || | ||| ||| ||| ||
Sbjct 502137 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502078
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || |||||||| || ||||||||||||||
Sbjct 502077 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502031
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || |||| | |||||| || || | ||| || ||||| ||||| ||||| ||
Sbjct 502485 CCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 502426
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || ||||| |||||||||||||| | ||||| ||| | ||
Sbjct 502425 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGGGGGA 502366
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | | || | ||| ||| ||| ||
Sbjct 502365 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502306
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || |||||||| || ||||||||||||||
Sbjct 502305 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502259
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| || ||||| ||||| ||||| ||
Sbjct 502941 CCACCCCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAG 502882
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || ||||| ||||| |||||||| | ||||| ||| | ||
Sbjct 502881 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 502822
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | | || | ||| ||| ||| ||
Sbjct 502821 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 502762
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || |||||||| || ||||||||||||||
Sbjct 502761 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502715
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| || || | ||| || ||||| ||||| ||||| ||
Sbjct 502029 CCACCCCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAG 501970
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || || || || || |||||||| | ||||| || | ||
Sbjct 501969 AGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 501910
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| |||||||| || | || || ||| || || || || | || ||| ||| |
Sbjct 501909 ATGCCCTCCTTATCTTGGATCTTGGCTTTAAC--ATTCTCAATAGTGTCGCTGGGCTCCA 501852
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||| ||| ||||| || || |||||||| || ||||||||||||||
Sbjct 501851 CCTCAAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 501803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325589357931140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |