Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 587 8e-163
seq25415 540 1e-148
>seq21827
Length=6214
Score = 587 bits (650), Expect = 8e-163
Identities = 726/988 (73%), Gaps = 4/988 (0%)
Strand=Plus/Plus
Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110
||||| | ||| |||| ||| | |||||| | || |||| ||||| ||||| |
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169
||||| || || || | | |||||| |||| || ||| | || ||| | || || ||
Sbjct 5091 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 5149
Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229
||| || ||||| || |||||||| ||||| ||| |||| ||||| | ||||| |||||
Sbjct 5150 TCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 5209
Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289
|| || |||||||| || ||||| |||| || || ||| | || || ||||| ||
Sbjct 5210 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGAT 5269
Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349
|||||||| || || ||||||| ||| | ||||| |||||||||| | || | ||
Sbjct 5270 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 5329
Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409
| ||||| | | || | | |||||||| ||||||||||||||| || |||
Sbjct 5330 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 5389
Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGC 157469
| | ||||||||||| ||||| |||||| || || || || || || ||||| | |||
Sbjct 5390 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 5449
Query 157470 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 157529
|| ||| | ||||||| | |||||||| || || || | ||||||||| || ||
Sbjct 5450 TGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAAT 5509
Query 157530 CTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCC 157589
|||||||||||| |||| ||| | || ||||| || |||||||| || |||||||| ||
Sbjct 5510 CTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 5569
Query 157590 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 157649
|| |||||| | ||||| ||||| |||||||| || || | ||| ||||||||| ||
Sbjct 5570 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 5629
Query 157650 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTATG 157708
| || ||||| | | ||| || | ||||| || |||| || || || | |
Sbjct 5630 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 5688
Query 157709 GTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCG 157768
|||||| ||||||||||| ||||| || ||||| ||||| ||||| || ||||| || |
Sbjct 5689 GTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTG 5748
Query 157769 GTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCG 157828
| || ||||||||||||| ||| ||||||||| | | | ||||||||||| |
Sbjct 5749 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 5808
Query 157829 CCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 157888
| || |||||||| || || || ||||||||||| | || | ||||| ||||| || |
Sbjct 5809 CTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTA 5868
Query 157889 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 157948
|| | || |||||||| |||||||| || | ||||| |||| |||||||| | || |
Sbjct 5869 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5928
Query 157949 CCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158008
||||||| ||| | | ||||| ||| | |||||||||||||||||||| |||||||
Sbjct 5929 CCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACG 5988
Query 158009 CACACAACTTCCCACTGGATCTTGCTGC 158036
| || |||||||| || ||||| |||||
Sbjct 5989 CTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 540 bits (598), Expect = 1e-148
Identities = 730/1012 (72%), Gaps = 4/1012 (0%)
Strand=Plus/Plus
Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834
||||| || | || |||||| | |||| |||||||||||||| || ||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894
|| | || | || ||| ||| | || | || |||||| |||| || || || ||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG-TGCAAACTTTCT 158953
| || |||||||| |||||| | || | ||||||| | || || ||||| ||| |
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAA-CTTCTT 544
Query 158954 TACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGG 159013
|| || |||||||| ||||| ||| || | | | || ||| | || | || |||||
Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGG 604
Query 159014 TCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGT 159073
||||| || ||||| ||||| | ||| ||| | || || || |||| ||||||
Sbjct 605 CCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 664
Query 159074 GGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 159133
|| || ||||| || || | ||||| ||||||||| | || || |||||||| || ||
Sbjct 665 TGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 724
Query 159134 -TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159192
||| || | | || || || ||||| || || ||||| ||||| ||||| |||||||
Sbjct 725 ATCTGTTCAAT-TACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTG 783
Query 159193 TCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTG 159252
| || ||||| || || || || |||||||| ||||||| || || || ||||
Sbjct 784 TTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTG 843
Query 159253 GGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAA 159312
| || || || ||||| | ||| | ||||| | |||||||| || ||||||||| | |
Sbjct 844 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 903
Query 159313 ACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTC 159372
|||| || |||||||||||||||||||| | | || | || || |||| |||||||
Sbjct 904 ACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTC 963
Query 159373 ATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGG 159432
|||| | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 964 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGG 1023
Query 159433 CGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 159492
| ||| | ||||||||| || || |||||||| |||||||| || |||||||| ||||
Sbjct 1024 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 1083
Query 159493 CGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTG 159552
| || ||||| || |||| ||||| || || || ||| | |||||||||||||| ||||
Sbjct 1084 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 1143
Query 159553 TGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTC 159612
| || || | ||| |||||| | |||| | | ||||| || || ||||| |
Sbjct 1144 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTAC 1203
Query 159613 GTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGT 159672
|||| || || ||||| ||| || ||| | ||||| |||||||| |||||||| || |
Sbjct 1204 GTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTT 1263
Query 159673 TCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATC 159732
|||||||||| || ||||| | || ||||| | ||||||||| |||| || ||||
Sbjct 1264 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 1323
Query 159733 AACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
| || ||||||||| | || ||||| || || |||||||| | || |||||
Sbjct 1324 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 1375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545095977124800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |