Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq2700 114 2e-20
seq19978 109 1e-18
>seq2700
Length=1111883
Score = 114 bits (126), Expect = 2e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 58378 AGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCAT 58437
||| || |||||||||| | | |||||||| || |||||| | || ||||||||||||||
Sbjct 330240 AGCCTTGTGGTGGTACTTTGTCTCTAAAGGCATTGAATACCTGGACACAGTGTTTTTCAT 330181
Query 58438 ACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTT 58497
|| || |||||||| || || || | ||| | || || |||||||| | || |||||
Sbjct 330180 TCTGAGAAAAAAGTTCAACCAAGTGACCTTCTTGCATGTGTATCATCACTGCACCATGTT 330121
Query 58498 TACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540
||| | | ||| | || || |||||| | || ||||| |||
Sbjct 330120 CACTCTGTGGTGGATCGGCATCAAATGGGTGGCCGGAGGACAG 330078
>seq19978
Length=287087
Score = 109 bits (120), Expect = 1e-18
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428
||||||| ||| | ||||||||||| || |||||||| | || | | || || ||
Sbjct 68498 GATAGCCTCAGCTCTTTGGTGGTACTACATTTCTAAAGGAGTGGAGTTTCTGGACACTGT 68557
Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488
|||||||| | ||||||||||| || || || ||||||||||| || || ||||| |
Sbjct 68558 ATTTTTCATTTTGAGGAAAAAGTTCAACCAAGTAAGCTTTCTACATGTCTACCATCACTG 68617
Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGG 58541
|||||||| | || | ||| | || ||||||||| | | ||||| ||||
Sbjct 68618 CACTATGTTCATCTTGTGGTGGATTGGCATTAAATGGGTCCCCGGAGGACAGG 68670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903116913801600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |