Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2700 114 2e-20 seq19978 109 1e-18 >seq2700 Length=1111883 Score = 114 bits (126), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 58378 AGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCAT 58437 ||| || |||||||||| | | |||||||| || |||||| | || |||||||||||||| Sbjct 330240 AGCCTTGTGGTGGTACTTTGTCTCTAAAGGCATTGAATACCTGGACACAGTGTTTTTCAT 330181 Query 58438 ACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTT 58497 || || |||||||| || || || | ||| | || || |||||||| | || ||||| Sbjct 330180 TCTGAGAAAAAAGTTCAACCAAGTGACCTTCTTGCATGTGTATCATCACTGCACCATGTT 330121 Query 58498 TACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 ||| | | ||| | || || |||||| | || ||||| ||| Sbjct 330120 CACTCTGTGGTGGATCGGCATCAAATGGGTGGCCGGAGGACAG 330078 >seq19978 Length=287087 Score = 109 bits (120), Expect = 1e-18 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 ||||||| ||| | ||||||||||| || |||||||| | || | | || || || Sbjct 68498 GATAGCCTCAGCTCTTTGGTGGTACTACATTTCTAAAGGAGTGGAGTTTCTGGACACTGT 68557 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 |||||||| | ||||||||||| || || || ||||||||||| || || ||||| | Sbjct 68558 ATTTTTCATTTTGAGGAAAAAGTTCAACCAAGTAAGCTTTCTACATGTCTACCATCACTG 68617 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGG 58541 |||||||| | || | ||| | || ||||||||| | | ||||| |||| Sbjct 68618 CACTATGTTCATCTTGTGGTGGATTGGCATTAAATGGGTCCCCGGAGGACAGG 68670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903116913801600